RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 SLC38A11Q08AI6 406 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 HABP2Q14520 560 aaPredicted RBP11.48□□□□□ -0.57
USP39-207ENST00000450066 OR8G2PQ6IF36 304 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 LHFPL4Q7Z7J7 247 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 LILRB2Q8N423 598 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 CXorf58Q96LI9 332 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 TBX15Q96SF7 602 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 RNF5Q99942 180 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 ENY2Q9NPA8 101 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 ANKRD17O75179 2603 aaKnown RBP11.48□□□□□ -0.57
USP39-207ENST00000450066 C15orf62A8K5M9 175 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 OOSP1A8MZH6 123 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 TIMM23O14925 209 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 IFNA5P01569 189 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 CD1BP29016 333 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 SULT1A2P50226 295 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 ATP6V1FQ16864 119 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 TEX45Q8NA69 505 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 OR10P1Q8NGE3 313 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 PINX1Q96BK5 328 aaKnown RBP11.48□□□□□ -0.57
USP39-207ENST00000450066 GNPNAT1Q96EK6 184 aaPredicted RBP11.48□□□□□ -0.57
USP39-207ENST00000450066 COMMD5Q9GZQ3 224 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 SH3BGRL3Q9H299 93 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 LPAR2Q9HBW0 351 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 HILPDAQ9Y5L2 63 aa11.48□□□□□ -0.57
USP39-207ENST00000450066 TET2Q6N021 2002 aaPredicted RBP11.47□□□□□ -0.57
USP39-207ENST00000450066 SLC25A17O43808 307 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 IFNA10P01566 189 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 MYOD1P15172 320 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 SLC25A16P16260 332 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 S100A1P23297 94 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 LGALS4P56470 323 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 KRTAP10-9P60411 292 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 PAX8Q06710 450 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 CLEC12BQ2HXU8 276 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 CCDC144NLQ6NUI1 221 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 COMMD7Q86VX2 200 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 CFHR4Q92496 578 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 SAT2Q96F10 170 aaPredicted RBP11.47□□□□□ -0.57
USP39-207ENST00000450066 POLQO75417 2590 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 SVEP1Q4LDE5 3571 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 A0A1W2PRD5 423 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 A0A1W2PRF3 423 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 A0A1W2PRM7 423 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 ATP6V0CP27449 155 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 OR1L8Q8NGR8 309 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 HINT2Q9BX68 163 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 PARD6GQ9BYG4 376 aaPredicted RBP11.47□□□□□ -0.57
USP39-207ENST00000450066 ZNF430Q9H8G1 570 aaPredicted RBP11.47□□□□□ -0.57
USP39-207ENST00000450066 PLEKHA3Q9HB20 300 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 PLA2G2EQ9NZK7 142 aa11.47□□□□□ -0.57
USP39-207ENST00000450066 TBL2Q9Y4P3 447 aaKnown RBP11.47□□□□□ -0.57
USP39-207ENST00000450066 ABCA12Q86UK0 2595 aa11.46□□□□□ -0.57
USP39-207ENST00000450066 WNK2Q9Y3S1 2297 aa11.46□□□□□ -0.57
USP39-207ENST00000450066 ZNF705EA8MWA4 302 aaPredicted RBP11.46□□□□□ -0.57
USP39-207ENST00000450066 VENTXO95231 258 aa11.46□□□□□ -0.57
USP39-207ENST00000450066 CRYGBP07316 175 aa11.46□□□□□ -0.57
USP39-207ENST00000450066 OR8U8P0C7N1 319 aa11.46□□□□□ -0.57
USP39-207ENST00000450066 PSG5Q15238 335 aa11.46□□□□□ -0.57
USP39-207ENST00000450066 SLC25A24Q6NUK1 477 aa11.46□□□□□ -0.57
USP39-207ENST00000450066 THNSL2Q86YJ6 484 aa11.46□□□□□ -0.57
USP39-207ENST00000450066 PSMG3-AS1Q96PY0 264 aa11.46□□□□□ -0.57
USP39-207ENST00000450066 CITED4Q96RK1 184 aa11.46□□□□□ -0.57
USP39-207ENST00000450066 NDUFA4L2Q9NRX3 87 aa11.46□□□□□ -0.57
USP39-207ENST00000450066 BEX4Q9NWD9 120 aaPredicted RBP11.46□□□□□ -0.57
USP39-207ENST00000450066 PFDN2Q9UHV9 154 aa11.46□□□□□ -0.57
USP39-207ENST00000450066 TNCP24821 2201 aa11.46□□□□□ -0.58
USP39-207ENST00000450066 APCP25054 2843 aa11.46□□□□□ -0.58
USP39-207ENST00000450066 ABCA2Q9BZC7 2435 aa11.46□□□□□ -0.58
USP39-207ENST00000450066 OPN1MWP04001 364 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 OPN1MW2P0DN77 364 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 OPN1MW3P0DN78 364 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 RAB5CP51148 216 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 SSX2Q16385 188 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 LRRC75BQ2VPJ9 315 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 SLC24A4Q8NFF2 622 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 SCGB1C1Q8TD33 95 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 TMEM147Q9BVK8 224 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 INS-IGF2F8WCM5 200 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 RRHO14718 337 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 ATP5IP56385 69 aaPredicted RBP11.45□□□□□ -0.58
USP39-207ENST00000450066 RAB11AP62491 216 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 MRGPRG-AS1Q2M3A8 158 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 VWC2Q2TAL6 325 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 OR2G3Q8NGZ4 309 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 TMEM170AQ8WVE7 144 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 MALSU1Q96EH3 234 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 TPSG1Q9NRR2 321 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 SIGLEC9Q9Y336 463 aa11.45□□□□□ -0.58
USP39-207ENST00000450066 NPY1RP25929 384 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 CNTFRP26992 372 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 F2RL1P55085 397 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 RUNX1Q01196 453 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 PRSS8Q16651 343 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 ETV3LQ6ZN32 361 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 MMD2Q8IY49 270 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 GGACTQ9BVM4 153 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 WDR61Q9GZS3 305 aaKnown RBP11.44□□□□□ -0.58
USP39-207ENST00000450066 UQCC1Q9NVA1 299 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 UMAD1C9J7I0 102 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms