RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 UBE2E2Q96LR5 201 aa10.94□□□□□ -0.66
GTF3C3-206ENST00000448539 TSC22D3Q99576 134 aa10.94□□□□□ -0.66
GTF3C3-206ENST00000448539 RTBDNQ9BSG5 229 aaPredicted RBP10.94□□□□□ -0.66
GTF3C3-206ENST00000448539 SLA2Q9H6Q3 261 aa10.94□□□□□ -0.66
GTF3C3-206ENST00000448539 COA4Q9NYJ1 87 aa10.94□□□□□ -0.66
GTF3C3-206ENST00000448539 PLXNB1O43157 2135 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 CENPXA8MT69 81 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 H3BUA1 57 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 SOX15O60248 233 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 TRGV3P03979 118 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 FGF2P09038 288 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 OR9G9P0C7N8 305 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 BAK1Q16611 211 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 LINC00299Q6ZSB3 139 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 C18orf65Q6ZTR6 163 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 ZNF491Q8N8L2 437 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 C4orf3Q8WVX3 66 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 S100ZQ8WXG8 99 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 TP53RKQ96S44 253 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 C5orf66Q9H5L9 145 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 PTTG2Q9NZH5 202 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 KCNIP3Q9Y2W7 256 aa10.93□□□□□ -0.66
GTF3C3-206ENST00000448539 TRAV3A0A0B4J244 114 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 LINC00854A0A1B0GVQ3 168 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 NAP1L6A6NFF2 107 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 HMX3A6NHT5 357 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 IL6RP08887 468 aaPredicted RBP10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 CD33P20138 364 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 MYCNOSP40205 109 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 DHODHQ02127 395 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 SP6Q3SY56 376 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 ASPHD1Q5U4P2 390 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 SGPP2Q8IWX5 399 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 CADM3Q8N126 398 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 OR4A16Q8NH70 328 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 RNASE11Q8TAA1 199 aaKnown RBP10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 MYOZ3Q8TDC0 251 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 SLC25A21Q9BQT8 299 aaPredicted RBP10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 NAA60Q9H7X0 242 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 FKBP11Q9NYL4 201 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 PRNDQ9UKY0 176 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 MGAM2Q2M2H8 2515 aa10.92□□□□□ -0.66
GTF3C3-206ENST00000448539 A0A0G2JLM5 398 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 C13orf42A0A1B0GVH6 325 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 CRYM-AS1A6NIL9 109 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 CCL24O00175 119 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 RBMXL2O75526 392 aaKnown RBP10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 DHFRP00374 187 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 OR5AC1P0C628 307 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 IL7P13232 177 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 MYOD1P15172 320 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 AKR1C4P17516 323 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 UCP1P25874 307 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 AKR1C2P52895 323 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 OR2B8PP59922 312 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 TMED4Q7Z7H5 227 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 TTC9CQ8N5M4 171 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 ADAD2Q8NCV1 583 aaKnown RBP10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 OR1L8Q8NGR8 309 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 RRNAD1Q96FB5 475 aaKnown RBP10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 SEC22AQ96IW7 307 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 OR5B12Q96R08 314 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 SDHCQ99643 169 aaPredicted RBP10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 GNB4Q9HAV0 340 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 NSG2Q9Y328 171 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 OR51B2Q9Y5P1 312 aa10.91□□□□□ -0.66
GTF3C3-206ENST00000448539 TEX22C9J3V5 150 aa10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 IGKV1-39P01597 117 aa10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 IGKV1D-39P04432 117 aa10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 ANXA3P12429 323 aa10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 RAB25P57735 213 aa10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 KIAA0141Q14154 515 aaPredicted RBP10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 DEFB136Q30KP8 78 aa10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 THOC7Q6I9Y2 204 aaKnown RBP10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 DPF1Q92782 380 aa10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 DUX3Q96PT4 197 aa10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 C7orf50Q9BRJ6 194 aaKnown RBP10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 HINT2Q9BX68 163 aa10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 QTRT1Q9BXR0 403 aaKnown RBP10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 TMEM222Q9H0R3 208 aa10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 AKIP1Q9NQ31 210 aa10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 ZNF257Q9Y2Q1 563 aa10.9□□□□□ -0.66
GTF3C3-206ENST00000448539 NPIPB5A8MRT5 1133 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 E7EUB6 86 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 BRI3O95415 125 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 IGHV3-11P01762 117 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 LGALS1P09382 135 aaKnown RBP10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 TRAPPC2P0DI81 140 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 TRAPPC2BP0DI82 140 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 DEFA4P12838 97 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 PSMB6P28072 239 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 MECP2P51608 486 aaKnown RBP10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 RUNX1Q01196 453 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 RBMS2Q15434 407 aaKnown RBP10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 HSD17B13Q7Z5P4 300 aaPredicted RBP10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 MRPL41Q8IXM3 137 aaKnown RBP10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 OR11H1Q8NG94 326 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 OR1N2Q8NGR9 330 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 OR5B3Q8NH48 314 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 RAX2Q96IS3 184 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms