RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 RNF141Q8WVD5 230 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 PCNPQ8WW12 178 aaKnown RBP11.75□□□□□ -0.53
CDK3-202ENST00000448471 TMED6Q8WW62 240 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 GINS3Q9BRX5 216 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 PCGF1Q9BSM1 259 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 SSBP3Q9BWW4 388 aaPredicted RBP11.75□□□□□ -0.53
CDK3-202ENST00000448471 RBKSQ9H477 322 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 SLC35D1Q9NTN3 355 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 PSENENQ9NZ42 101 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 ZNRD1Q9P1U0 126 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 APOA2P02652 100 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 OR9G9P0C7N8 305 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 PRRX1P54821 245 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 LCN2P80188 198 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 TUSC1Q2TAM9 212 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 FAM74A1Q5RGS3 127 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 ZNF429Q86V71 674 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 BEND2Q8NDZ0 799 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 OR4A16Q8NH70 328 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 RHOVQ96L33 236 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 MRPL20Q9BYC9 149 aaKnown RBP11.75□□□□□ -0.53
CDK3-202ENST00000448471 TMEM140Q9NV12 185 aa11.75□□□□□ -0.53
CDK3-202ENST00000448471 IGHV2-26A0A0B4J1V2 119 aa11.74□□□□□ -0.53
CDK3-202ENST00000448471 C22orf46C9J442 243 aa11.74□□□□□ -0.53
CDK3-202ENST00000448471 M0R1W7 72 aa11.74□□□□□ -0.53
CDK3-202ENST00000448471 IGLV1-47P01700 117 aa11.74□□□□□ -0.53
CDK3-202ENST00000448471 IL6RP08887 468 aaPredicted RBP11.74□□□□□ -0.53
CDK3-202ENST00000448471 SEC11BP0C7V7 166 aa11.74□□□□□ -0.53
CDK3-202ENST00000448471 IAPPP10997 89 aa11.74□□□□□ -0.53
CDK3-202ENST00000448471 SPCS3P61009 180 aa11.74□□□□□ -0.53
CDK3-202ENST00000448471 RELBQ01201 579 aa11.74□□□□□ -0.53
CDK3-202ENST00000448471 COMMD7Q86VX2 200 aa11.74□□□□□ -0.53
CDK3-202ENST00000448471 OR1S2Q8NGQ3 325 aa11.74□□□□□ -0.53
CDK3-202ENST00000448471 OR5C1Q8NGR4 320 aa11.74□□□□□ -0.53
CDK3-202ENST00000448471 OSR1Q8TAX0 266 aaPredicted RBP11.74□□□□□ -0.53
CDK3-202ENST00000448471 NABP2Q9BQ15 211 aa11.74□□□□□ -0.53
CDK3-202ENST00000448471 CLEC7AQ9BXN2 247 aa11.74□□□□□ -0.53
CDK3-202ENST00000448471 H0YJW9 148 aa11.73□□□□□ -0.53
CDK3-202ENST00000448471 RBMXL2O75526 392 aaKnown RBP11.73□□□□□ -0.53
CDK3-202ENST00000448471 DFFBO76075 338 aa11.73□□□□□ -0.53
CDK3-202ENST00000448471 CST7O76096 145 aa11.73□□□□□ -0.53
CDK3-202ENST00000448471 DYNLT3P51808 116 aa11.73□□□□□ -0.53
CDK3-202ENST00000448471 TMEM177Q53S58 311 aa11.73□□□□□ -0.53
CDK3-202ENST00000448471 TMEM14EPQ6UXP3 125 aa11.73□□□□□ -0.53
CDK3-202ENST00000448471 C1orf122Q6ZSJ8 110 aa11.73□□□□□ -0.53
CDK3-202ENST00000448471 OR13D1Q8NGV5 346 aa11.73□□□□□ -0.53
CDK3-202ENST00000448471 DTD1Q8TEA8 209 aa11.73□□□□□ -0.53
CDK3-202ENST00000448471 SAT2Q96F10 170 aaPredicted RBP11.73□□□□□ -0.53
CDK3-202ENST00000448471 FAM210AQ96ND0 272 aa11.73□□□□□ -0.53
CDK3-202ENST00000448471 PFDN2Q9UHV9 154 aa11.73□□□□□ -0.53
CDK3-202ENST00000448471 NUP50Q9UKX7 468 aa11.73□□□□□ -0.53
CDK3-202ENST00000448471 PRKDCP78527 4128 aaKnown RBP11.72□□□□□ -0.53
CDK3-202ENST00000448471 H3BP45 60 aa11.72□□□□□ -0.53
CDK3-202ENST00000448471 SCAF4O95104 1147 aaKnown RBP11.72□□□□□ -0.53
CDK3-202ENST00000448471 RNASE1P07998 156 aaKnown RBP11.72□□□□□ -0.53
CDK3-202ENST00000448471 SPP1P10451 314 aa11.72□□□□□ -0.53
CDK3-202ENST00000448471 SULT1A2P50226 295 aa11.72□□□□□ -0.53
CDK3-202ENST00000448471 HBG1P69891 147 aa11.72□□□□□ -0.53
CDK3-202ENST00000448471 HBG2P69892 147 aa11.72□□□□□ -0.53
CDK3-202ENST00000448471 HLA-DRB5Q30154 266 aa11.72□□□□□ -0.53
CDK3-202ENST00000448471 OR4A47Q6IF82 309 aa11.72□□□□□ -0.53
CDK3-202ENST00000448471 SSX9Q7RTT3 188 aa11.72□□□□□ -0.53
CDK3-202ENST00000448471 PDPNQ86YL7 162 aa11.72□□□□□ -0.53
CDK3-202ENST00000448471 TGIF2LXQ8IUE1 241 aa11.72□□□□□ -0.53
CDK3-202ENST00000448471 KIR3DL3Q8N743 410 aa11.72□□□□□ -0.53
CDK3-202ENST00000448471 TAF15Q92804 592 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDK3-202ENST00000448471 CXorf58Q96LI9 332 aa11.72□□□□□ -0.53
CDK3-202ENST00000448471 ATP5SQ99766 215 aa11.72□□□□□ -0.53
CDK3-202ENST00000448471 QTRT1Q9BXR0 403 aaKnown RBP11.72□□□□□ -0.53
CDK3-202ENST00000448471 FOXA2Q9Y261 457 aaPredicted RBP11.72□□□□□ -0.53
CDK3-202ENST00000448471 C15orf61A6NNL5 157 aa11.71□□□□□ -0.53
CDK3-202ENST00000448471 MC5RP33032 325 aa11.71□□□□□ -0.53
CDK3-202ENST00000448471 RAB13P51153 203 aa11.71□□□□□ -0.53
CDK3-202ENST00000448471 CLINT1Q14677 625 aa11.71□□□□□ -0.53
CDK3-202ENST00000448471 SPANXN5Q5MJ07 72 aa11.71□□□□□ -0.53
CDK3-202ENST00000448471 VKORC1L1Q8N0U8 176 aa11.71□□□□□ -0.53
CDK3-202ENST00000448471 BCL6BQ8N143 479 aaPredicted RBP11.71□□□□□ -0.53
CDK3-202ENST00000448471 ZNF48Q96MX3 618 aaPredicted RBP11.71□□□□□ -0.53
CDK3-202ENST00000448471 CITED4Q96RK1 184 aa11.71□□□□□ -0.53
CDK3-202ENST00000448471 TMEM14BQ9NUH8 114 aa11.71□□□□□ -0.53
CDK3-202ENST00000448471 BET1LQ9NYM9 111 aa11.71□□□□□ -0.53
CDK3-202ENST00000448471 STRAPQ9Y3F4 350 aaKnown RBP11.71□□□□□ -0.53
CDK3-202ENST00000448471 AMMECR1Q9Y4X0 333 aaPredicted RBP11.71□□□□□ -0.53
CDK3-202ENST00000448471 ANKRD34BA5PLL1 514 aa11.71□□□□□ -0.54
CDK3-202ENST00000448471 CEBPZOSA8MTT3 80 aa11.71□□□□□ -0.54
CDK3-202ENST00000448471 A8MXK9 166 aa11.71□□□□□ -0.54
CDK3-202ENST00000448471 FOXH1O75593 365 aa11.71□□□□□ -0.54
CDK3-202ENST00000448471 IFNA17P01571 189 aa11.71□□□□□ -0.54
CDK3-202ENST00000448471 IGKV1-16P04430 117 aa11.71□□□□□ -0.54
CDK3-202ENST00000448471 MDKP21741 143 aaPredicted RBP11.71□□□□□ -0.54
CDK3-202ENST00000448471 TMEM267Q0VDI3 215 aaPredicted RBP11.71□□□□□ -0.54
CDK3-202ENST00000448471 KLF17Q5JT82 389 aaPredicted RBP11.71□□□□□ -0.54
CDK3-202ENST00000448471 EIF4E3Q8N5X7 224 aaKnown RBP11.71□□□□□ -0.54
CDK3-202ENST00000448471 TMEM217Q8N7C4 229 aa11.71□□□□□ -0.54
CDK3-202ENST00000448471 Q8N7P7 452 aa11.71□□□□□ -0.54
CDK3-202ENST00000448471 OR4C13Q8NGP0 309 aa11.71□□□□□ -0.54
CDK3-202ENST00000448471 LHX4Q969G2 390 aa11.71□□□□□ -0.54
CDK3-202ENST00000448471 TSNAXQ99598 290 aaKnown RBP11.71□□□□□ -0.54
CDK3-202ENST00000448471 ONECUT1Q9UBC0 465 aa11.71□□□□□ -0.54
CDK3-202ENST00000448471 PRNDQ9UKY0 176 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms