RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 AREGP15514 252 aa9.77□□□□□ -0.85
PRPF40A-203ENST00000448428 ZP3P21754 424 aa9.77□□□□□ -0.85
PRPF40A-203ENST00000448428 OR2B8PP59922 312 aa9.77□□□□□ -0.85
PRPF40A-203ENST00000448428 KLF5Q13887 457 aaPredicted RBP9.77□□□□□ -0.85
PRPF40A-203ENST00000448428 C19orf35Q6ZS72 473 aa9.77□□□□□ -0.85
PRPF40A-203ENST00000448428 FAM223AQ8IWN6 122 aa9.77□□□□□ -0.85
PRPF40A-203ENST00000448428 NECAP1Q8NC96 275 aa9.77□□□□□ -0.85
PRPF40A-203ENST00000448428 COMMD9Q9P000 198 aa9.77□□□□□ -0.85
PRPF40A-203ENST00000448428 CCDC59Q9P031 241 aaKnown RBP9.77□□□□□ -0.85
PRPF40A-203ENST00000448428 ZNF256Q9Y2P7 627 aaPredicted RBP9.77□□□□□ -0.85
PRPF40A-203ENST00000448428 DPPA5A6NC42 116 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 MARCH11A6NNE9 402 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 H3BMQ9 156 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 GABARAPH6UMI1 98 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 OR2J3O76001 311 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 KRASP01116 189 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 IFNA6P05013 189 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 REG1AP05451 166 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 CRYGCP07315 174 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 PSMB6P28072 239 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 RNASE10Q5GAN6 216 aaKnown RBP9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 TBC1D26Q86UD7 250 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 SLC38A6Q8IZM9 456 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 TMEM229BQ8NBD8 167 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 OR4D10Q8NGI6 311 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 ISOC1Q96CN7 298 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 DIRAS2Q96HU8 199 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 FANCD2OSQ96PS1 177 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 COMMD5Q9GZQ3 224 aa9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 LSM4Q9Y4Z0 139 aaKnown RBP9.76□□□□□ -0.85
PRPF40A-203ENST00000448428 SORL1Q92673 2214 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 DNAH3Q8TD57 4116 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 TEX50A0A1B0GTY4 177 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 CTRB1P17538 263 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 TBPP20226 339 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 S100GP29377 79 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 G6PCP35575 357 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 ERVK-16P61578 105 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 EXOSC2Q13868 293 aaKnown RBP9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 KLK9Q2XQG4 91 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 C15orf32Q32M92 178 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 CTRB2Q6GPI1 263 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 LHFPL1Q86WI0 220 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 CADM3Q8N126 398 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 OR4C12Q96R67 309 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 ELOVL1Q9BW60 279 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 SLIRPQ9GZT3 109 aaKnown RBP9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 FBXL7Q9UJT9 491 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 KLK9Q9UKQ9 250 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 CEPT1Q9Y6K0 416 aa9.75□□□□□ -0.85
PRPF40A-203ENST00000448428 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 IGLC7A0M8Q6 106 aa9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 BMPR1BO00238 502 aa9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 NOL3O60936 208 aaKnown RBP9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 NDUFB8O95169 186 aa9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 RAB3DO95716 219 aa9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 CD74P04233 296 aa9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 FGF2P09038 288 aa9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 SPNP16150 400 aa9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 SYNJ2BPP57105 145 aa9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 TAS2R19P59542 299 aa9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 MRPS10P82664 201 aaKnown RBP9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 IL34Q6ZMJ4 242 aa9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 ARRDC1Q8N5I2 433 aa9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 OR10W1Q8NGF6 305 aa9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 FAM212BQ9NTI7 297 aaPredicted RBP9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 NSG2Q9Y328 171 aa9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 DMRT1Q9Y5R6 373 aa9.74□□□□□ -0.85
PRPF40A-203ENST00000448428 CTDSPLO15194 276 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 SNAPC5O75971 98 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 LY86O95711 162 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 DHFRP00374 187 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 IGKV1-39P01597 117 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 IGKV1D-39P04432 117 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 TRAPPC2P0DI81 140 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 TRAPPC2BP0DI82 140 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 DEFA4P12838 97 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 PGAM2P15259 253 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 PI3P19957 117 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 TNFSF8P32971 234 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 SSBP1Q04837 148 aaKnown RBP9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 DCTN2Q13561 401 aaKnown RBP9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 IL18Q14116 193 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 TATDN3Q17R31 274 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 RPEL1Q2QD12 228 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 STEAP1BQ6NZ63 245 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 OR9G4Q8NGQ1 327 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 OR6Q1Q8NGQ2 317 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 OR1L8Q8NGR8 309 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 TERB2Q8NHR7 220 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 SMIM4Q8WVI0 70 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 SEC22AQ96IW7 307 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 SRSF8Q9BRL6 282 aaKnown RBP9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 QTRT1Q9BXR0 403 aaKnown RBP9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 C6orf62Q9GZU0 229 aaPredicted RBP9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 NXF2Q9GZY0 626 aaKnown RBP9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 NDUFA4L2Q9NRX3 87 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 S4R3C0 116 aa9.73□□□□□ -0.85
PRPF40A-203ENST00000448428 IGLV11-55A0A075B6I3 123 aa9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 DBX1A6NMT0 343 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms