RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 MLANAQ16655 118 aa12.16□□□□□ -0.46
SF1-211ENST00000448404 KDF1Q8NAX2 398 aaPredicted RBP12.16□□□□□ -0.46
SF1-211ENST00000448404 IGFBPL1Q8WX77 278 aa12.16□□□□□ -0.46
SF1-211ENST00000448404 RAB24Q969Q5 203 aa12.16□□□□□ -0.46
SF1-211ENST00000448404 JPT1Q9UK76 154 aa12.16□□□□□ -0.46
SF1-211ENST00000448404 KBTBD11-OT1A0A1B0GTJ5 212 aa12.16□□□□□ -0.46
SF1-211ENST00000448404 CYB5BO43169 146 aa12.16□□□□□ -0.46
SF1-211ENST00000448404 CGB3P0DN86 165 aa12.16□□□□□ -0.46
SF1-211ENST00000448404 CGB7P0DN87 165 aa12.16□□□□□ -0.46
SF1-211ENST00000448404 SELENOVP59797 346 aa12.16□□□□□ -0.46
SF1-211ENST00000448404 TBR1Q16650 682 aa12.16□□□□□ -0.46
SF1-211ENST00000448404 H1FXQ92522 213 aaKnown RBP12.16□□□□□ -0.46
SF1-211ENST00000448404 NIPSNAP3BQ9BS92 247 aa12.16□□□□□ -0.46
SF1-211ENST00000448404 PHOX2AO14813 284 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 YPEL1O60688 119 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 IGHV3-48P01763 117 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 CD81P60033 236 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 MRPS11P82912 194 aaKnown RBP12.15□□□□□ -0.46
SF1-211ENST00000448404 RELBQ01201 579 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 C21orf62-AS1Q17RA5 79 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 TMEM108Q6UXF1 575 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 HIST3H2BBQ8N257 126 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 FAM169BQ8N8A8 192 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 ZCCHC14Q8WYQ9 949 aaKnown RBP12.15□□□□□ -0.46
SF1-211ENST00000448404 YPEL2Q96QA6 119 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 TMEM147Q9BVK8 224 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 HSPB1P04792 205 aaKnown RBP12.15□□□□□ -0.46
SF1-211ENST00000448404 NUBP1P53384 320 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 CDSNQ15517 529 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 MIC13Q5XKP0 118 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 Q8N7P7 452 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 PPP1R35Q8TAP8 253 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 LINC01560Q8TB33 94 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 ATG101Q9BSB4 218 aa12.15□□□□□ -0.46
SF1-211ENST00000448404 TANC2Q9HCD6 1990 aa12.15□□□□□ -0.47
SF1-211ENST00000448404 WNK2Q9Y3S1 2297 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 TRGV10A0A0A0MS01 117 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 F2RL2O00254 374 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 ELOBQ15370 118 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 KRTCAP3Q53RY4 240 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 WDR25Q64LD2 544 aaPredicted RBP12.14□□□□□ -0.47
SF1-211ENST00000448404 OR4A47Q6IF82 309 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 IL19Q9UHD0 177 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 PGPEP1LA6NFU8 196 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 FAM90A26D6RGX4 464 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 PAGE4O60829 102 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 LY6HO94772 140 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 HPRT1P00492 218 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 MAS1LP35410 378 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 TMEM68Q96MH6 324 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 MS4A5Q9H3V2 200 aa12.14□□□□□ -0.47
SF1-211ENST00000448404 TRGV8A0A0C4DH27 118 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 A0A1B0GW64 132 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 HBE1P02100 147 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 GATA2P23769 480 aaPredicted RBP12.13□□□□□ -0.47
SF1-211ENST00000448404 G0S2P27469 103 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 CFHR2P36980 270 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 MZT1Q08AG7 82 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 ZNF788Q6ZQV5 615 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 TVP23CQ96ET8 276 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 NEU1Q99519 415 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 PSMG3Q9BT73 122 aaPredicted RBP12.13□□□□□ -0.47
SF1-211ENST00000448404 UNKLQ9H9P5 680 aaKnown RBP12.13□□□□□ -0.47
SF1-211ENST00000448404 TCF19Q9Y242 345 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 GFRA3O60609 400 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 APELAP0DMC3 54 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 TUBG1P23258 451 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 ADIRFQ15847 76 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 SPATA31B1PQ5VZV4 182 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 OR10W1Q8NGF6 305 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 OR4F5Q8NH21 305 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 MBD3L1Q8WWY6 194 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 DDB2Q92466 427 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 OR4F4Q96R69 305 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 DERL1Q9BUN8 251 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 COL25A1Q9BXS0 654 aaPredicted RBP12.13□□□□□ -0.47
SF1-211ENST00000448404 TUBG2Q9NRH3 451 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 ITPR1Q14643 2758 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 FAM90A27PA6NNH2 459 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 CD1BP29016 333 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 C1orf159Q96HA4 380 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 SAP30LQ9HAJ7 183 aa12.13□□□□□ -0.47
SF1-211ENST00000448404 IGHV3-72A0A0B4J1Y9 119 aa12.12□□□□□ -0.47
SF1-211ENST00000448404 C17orf100A8MU93 164 aa12.12□□□□□ -0.47
SF1-211ENST00000448404 TRGC1P0CF51 173 aa12.12□□□□□ -0.47
SF1-211ENST00000448404 IRF2P14316 349 aa12.12□□□□□ -0.47
SF1-211ENST00000448404 HNF1AP20823 631 aa12.12□□□□□ -0.47
SF1-211ENST00000448404 ERVK-16P61578 105 aa12.12□□□□□ -0.47
SF1-211ENST00000448404 RPL31P62899 125 aaKnown RBP12.12□□□□□ -0.47
SF1-211ENST00000448404 SERF2P84101 59 aa12.12□□□□□ -0.47
SF1-211ENST00000448404 PACRGQ96M98 296 aaPredicted RBP12.12□□□□□ -0.47
SF1-211ENST00000448404 C2orf88Q9BSF0 95 aa12.12□□□□□ -0.47
SF1-211ENST00000448404 SLC25A10Q9UBX3 287 aaPredicted RBP12.12□□□□□ -0.47
SF1-211ENST00000448404 CT45A6P0DMU7 189 aa12.12□□□□□ -0.47
SF1-211ENST00000448404 CT45A5P0DMU8 189 aa12.12□□□□□ -0.47
SF1-211ENST00000448404 CT45A7P0DMV0 189 aa12.12□□□□□ -0.47
SF1-211ENST00000448404 VDAC2P45880 294 aaPredicted RBP12.12□□□□□ -0.47
SF1-211ENST00000448404 ATP5G3P48201 142 aa12.12□□□□□ -0.47
SF1-211ENST00000448404 TREML4Q6UXN2 200 aa12.12□□□□□ -0.47
SF1-211ENST00000448404 ZNF709Q8N972 641 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms