RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 OR51B2Q9Y5P1 312 aa15.56■□□□□ 0.08
SGCE-207ENST00000447873 TET2Q6N021 2002 aaPredicted RBP15.56■□□□□ 0.08
SGCE-207ENST00000447873 MAST4O15021 2626 aa15.55■□□□□ 0.08
SGCE-207ENST00000447873 ST8SIA3O43173 380 aa15.55■□□□□ 0.08
SGCE-207ENST00000447873 ACTL6BO94805 426 aa15.55■□□□□ 0.08
SGCE-207ENST00000447873 RASL11BQ9BPW5 248 aa15.55■□□□□ 0.08
SGCE-207ENST00000447873 COMMD5Q9GZQ3 224 aa15.55■□□□□ 0.08
SGCE-207ENST00000447873 CACFD1Q9UGQ2 172 aa15.55■□□□□ 0.08
SGCE-207ENST00000447873 PLXNB1O43157 2135 aa15.55■□□□□ 0.08
SGCE-207ENST00000447873 FAM90A26D6RGX4 464 aa15.54■□□□□ 0.08
SGCE-207ENST00000447873 IFNA17P01571 189 aa15.54■□□□□ 0.08
SGCE-207ENST00000447873 MBPP02686 304 aaPredicted RBP15.54■□□□□ 0.08
SGCE-207ENST00000447873 FGF2P09038 288 aa15.54■□□□□ 0.08
SGCE-207ENST00000447873 S100A10P60903 97 aa15.54■□□□□ 0.08
SGCE-207ENST00000447873 CD300CQ08708 224 aa15.54■□□□□ 0.08
SGCE-207ENST00000447873 RAB32Q13637 225 aa15.54■□□□□ 0.08
SGCE-207ENST00000447873 MRGPRG-AS1Q2M3A8 158 aa15.54■□□□□ 0.08
SGCE-207ENST00000447873 C16orf82Q7Z2V1 217 aa15.54■□□□□ 0.08
SGCE-207ENST00000447873 Q8N9W7 124 aa15.54■□□□□ 0.08
SGCE-207ENST00000447873 ZFP57Q9NU63 452 aa15.54■□□□□ 0.08
SGCE-207ENST00000447873 VPREB3Q9UKI3 123 aa15.54■□□□□ 0.08
SGCE-207ENST00000447873 FCN1O00602 326 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 FGF16O43320 207 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 OPN1MWP04001 364 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 OPN1MW2P0DN77 364 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 OPN1MW3P0DN78 364 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 PSMB6P28072 239 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 MAS1LP35410 378 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 GNB1P62873 340 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 ID3Q02535 119 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 TNFRSF9Q07011 255 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 TNXAQ16473 311 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 AARDQ4LEZ3 155 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 OR52E5Q8NH55 327 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 MAGT1Q9H0U3 335 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 HSPB7Q9UBY9 170 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 ZNF257Q9Y2Q1 563 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 LSM5Q9Y4Y9 91 aaKnown RBP15.53■□□□□ 0.08
SGCE-207ENST00000447873 POMT1Q9Y6A1 747 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 M0QZK8 103 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 WRBO00258 174 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 CA2P00918 260 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 MYOD1P15172 320 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 HSPE1P61604 102 aaKnown RBP15.53■□□□□ 0.08
SGCE-207ENST00000447873 FGL1Q08830 312 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 TCTE3Q8IZS6 198 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 C5orf56Q8N8D9 126 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 OR5B3Q8NH48 314 aa15.53■□□□□ 0.08
SGCE-207ENST00000447873 TEX50A0A1B0GTY4 177 aa15.52■□□□□ 0.07
SGCE-207ENST00000447873 SMLR1H3BR10 107 aa15.52■□□□□ 0.07
SGCE-207ENST00000447873 CHST1O43916 411 aa15.52■□□□□ 0.07
SGCE-207ENST00000447873 MED6O75586 246 aa15.52■□□□□ 0.07
SGCE-207ENST00000447873 CNIH1O95406 144 aa15.52■□□□□ 0.07
SGCE-207ENST00000447873 MPC2O95563 127 aa15.52■□□□□ 0.07
SGCE-207ENST00000447873 SPCS3P61009 180 aa15.52■□□□□ 0.07
SGCE-207ENST00000447873 POLR2GP62487 172 aaKnown RBP eCLIP15.52■□□□□ 0.07
SGCE-207ENST00000447873 TMEM86BQ8N661 226 aa15.52■□□□□ 0.07
SGCE-207ENST00000447873 OR1L8Q8NGR8 309 aa15.52■□□□□ 0.07
SGCE-207ENST00000447873 HINT2Q9BX68 163 aa15.52■□□□□ 0.07
SGCE-207ENST00000447873 K7EPK0 472 aa15.51■□□□□ 0.07
SGCE-207ENST00000447873 PET100P0DJ07 73 aa15.51■□□□□ 0.07
SGCE-207ENST00000447873 COMPP49747 757 aaPredicted RBP15.51■□□□□ 0.07
SGCE-207ENST00000447873 Q5BKY6 102 aa15.51■□□□□ 0.07
SGCE-207ENST00000447873 SPINK9Q5DT21 86 aa15.51■□□□□ 0.07
SGCE-207ENST00000447873 CEBPZOSA8MTT3 80 aa15.5■□□□□ 0.07
SGCE-207ENST00000447873 SYNGR2O43760 224 aa15.5■□□□□ 0.07
SGCE-207ENST00000447873 SSSCA1O60232 199 aa15.5■□□□□ 0.07
SGCE-207ENST00000447873 HLA-DRB1P01911 266 aa15.5■□□□□ 0.07
SGCE-207ENST00000447873 RLN2P04090 185 aa15.5■□□□□ 0.07
SGCE-207ENST00000447873 PDLIM3Q53GG5 364 aaPredicted RBP15.5■□□□□ 0.07
SGCE-207ENST00000447873 C10orf55Q5SWW7 151 aa15.5■□□□□ 0.07
SGCE-207ENST00000447873 ZNF562Q6V9R5 426 aa15.5■□□□□ 0.07
SGCE-207ENST00000447873 ZNF418Q8TF45 676 aaPredicted RBP15.5■□□□□ 0.07
SGCE-207ENST00000447873 DUX5Q96PT3 197 aa15.5■□□□□ 0.07
SGCE-207ENST00000447873 RBKSQ9H477 322 aa15.5■□□□□ 0.07
SGCE-207ENST00000447873 RCL1Q9Y2P8 373 aaKnown RBP15.5■□□□□ 0.07
SGCE-207ENST00000447873 AMY1AP04745 511 aa15.49■□□□□ 0.07
SGCE-207ENST00000447873 RPL27AP46776 148 aaKnown RBP15.49■□□□□ 0.07
SGCE-207ENST00000447873 PRCDQ00LT1 54 aa15.49■□□□□ 0.07
SGCE-207ENST00000447873 FXYD3Q14802 87 aa15.49■□□□□ 0.07
SGCE-207ENST00000447873 THAP6Q8TBB0 222 aa15.49■□□□□ 0.07
SGCE-207ENST00000447873 SRSF12Q8WXF0 261 aaKnown RBP15.49■□□□□ 0.07
SGCE-207ENST00000447873 TRAV14DV4A0A0A6YYC5 116 aa15.49■□□□□ 0.07
SGCE-207ENST00000447873 SH2D7A6NKC9 451 aaPredicted RBP15.49■□□□□ 0.07
SGCE-207ENST00000447873 DEDDO75618 318 aa15.49■□□□□ 0.07
SGCE-207ENST00000447873 PVALBP20472 110 aaPredicted RBP15.49■□□□□ 0.07
SGCE-207ENST00000447873 CX3CL1P78423 397 aa15.49■□□□□ 0.07
SGCE-207ENST00000447873 SSBP2P81877 361 aaPredicted RBP15.49■□□□□ 0.07
SGCE-207ENST00000447873 DTD1Q8TEA8 209 aa15.49■□□□□ 0.07
SGCE-207ENST00000447873 PLEKHA3Q9HB20 300 aa15.49■□□□□ 0.07
SGCE-207ENST00000447873 ENY2Q9NPA8 101 aa15.49■□□□□ 0.07
SGCE-207ENST00000447873 NDUFA4L2Q9NRX3 87 aa15.49■□□□□ 0.07
SGCE-207ENST00000447873 IGHV7-81A0A0B4J1V7 117 aa15.48■□□□□ 0.07
SGCE-207ENST00000447873 DNAJC9-AS1A6NH13 148 aa15.48■□□□□ 0.07
SGCE-207ENST00000447873 E7EUB6 86 aa15.48■□□□□ 0.07
SGCE-207ENST00000447873 G3V3Q6 166 aa15.48■□□□□ 0.07
SGCE-207ENST00000447873 H0YIZ8 118 aa15.48■□□□□ 0.07
SGCE-207ENST00000447873 L7N2F9 121 aa15.48■□□□□ 0.07
SGCE-207ENST00000447873 FAM157CP0CG43 387 aa15.48■□□□□ 0.07
SGCE-207ENST00000447873 HOXA1P49639 335 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms