RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 LINC00052Q96N35 136 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 OR5B12Q96R08 314 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 DHRS9Q9BPW9 319 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 MICU1Q9BPX6 476 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 ZNF471Q9BX82 626 aaPredicted RBP3.01□□□□□ -1.93
VPS29-202ENST00000447578 REG4Q9BYZ8 158 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 CHST5Q9GZS9 411 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 METTL9Q9H1A3 318 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 SLC25A22Q9H936 323 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 TMEM38BQ9NVV0 291 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 MED9Q9NWA0 146 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 DUX4Q9UBX2 424 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 TNFSF18Q9UNG2 199 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 C14orf166Q9Y224 244 aaKnown RBP3.01□□□□□ -1.93
VPS29-202ENST00000447578 CSAG2Q9Y5P2 127 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 SLC25A15Q9Y619 301 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 THADAQ6YHU6 1953 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 TDRD6O60522 2096 aaKnown RBP3□□□□□ -1.93
VPS29-202ENST00000447578 PHF3Q92576 2039 aaKnown RBP3□□□□□ -1.93
VPS29-202ENST00000447578 A0A0B4J2A0 478 aa3□□□□□ -1.93
VPS29-202ENST00000447578 ZNF816-ZNF321PA0A0X1KG74 233 aa3□□□□□ -1.93
VPS29-202ENST00000447578 F6UB75 175 aa3□□□□□ -1.93
VPS29-202ENST00000447578 NDUFS8O00217 210 aa3□□□□□ -1.93
VPS29-202ENST00000447578 ANGPTL7O43827 346 aa3□□□□□ -1.93
VPS29-202ENST00000447578 ADAP1O75689 374 aa3□□□□□ -1.93
VPS29-202ENST00000447578 NRASP01111 189 aa3□□□□□ -1.93
VPS29-202ENST00000447578 HSPB1P04792 205 aaKnown RBP3□□□□□ -1.93
VPS29-202ENST00000447578 SERPINA7P05543 415 aa3□□□□□ -1.93
VPS29-202ENST00000447578 CRHP06850 196 aa3□□□□□ -1.93
VPS29-202ENST00000447578 GP1BAP07359 652 aa3□□□□□ -1.93
VPS29-202ENST00000447578 CST2P09228 141 aa3□□□□□ -1.93
VPS29-202ENST00000447578 M6PRP20645 277 aa3□□□□□ -1.93
VPS29-202ENST00000447578 PRKACBP22694 351 aa3□□□□□ -1.93
VPS29-202ENST00000447578 CRYGSP22914 178 aa3□□□□□ -1.93
VPS29-202ENST00000447578 PSMB6P28072 239 aa3□□□□□ -1.93
VPS29-202ENST00000447578 CYB561P49447 251 aa3□□□□□ -1.93
VPS29-202ENST00000447578 APOC4P55056 127 aa3□□□□□ -1.93
VPS29-202ENST00000447578 PCBD1P61457 104 aa3□□□□□ -1.93
VPS29-202ENST00000447578 PSG4Q00888 419 aa3□□□□□ -1.93
VPS29-202ENST00000447578 SIGLEC14Q08ET2 396 aa3□□□□□ -1.93
VPS29-202ENST00000447578 ZNF345Q14585 488 aa3□□□□□ -1.93
VPS29-202ENST00000447578 CLINT1Q14677 625 aa3□□□□□ -1.93
VPS29-202ENST00000447578 RSU1Q15404 277 aa3□□□□□ -1.93
VPS29-202ENST00000447578 TAF9Q16594 264 aa3□□□□□ -1.93
VPS29-202ENST00000447578 TMEM128Q5BJH2 165 aa3□□□□□ -1.93
VPS29-202ENST00000447578 AADACL3Q5VUY0 350 aa3□□□□□ -1.93
VPS29-202ENST00000447578 H3F3CQ6NXT2 135 aa3□□□□□ -1.93
VPS29-202ENST00000447578 CLEC18BQ6UXF7 455 aa3□□□□□ -1.93
VPS29-202ENST00000447578 MRPL21Q7Z2W9 205 aaKnown RBP3□□□□□ -1.93
VPS29-202ENST00000447578 C6orf201Q7Z4U5 140 aa3□□□□□ -1.93
VPS29-202ENST00000447578 LHFPL1Q86WI0 220 aa3□□□□□ -1.93
VPS29-202ENST00000447578 TMEM105Q8N8V8 129 aa3□□□□□ -1.93
VPS29-202ENST00000447578 ABHD3Q8WU67 409 aa3□□□□□ -1.93
VPS29-202ENST00000447578 ARPC1AQ92747 370 aa3□□□□□ -1.93
VPS29-202ENST00000447578 BORCS8Q96FH0 119 aa3□□□□□ -1.93
VPS29-202ENST00000447578 CPNE2Q96FN4 548 aaPredicted RBP3□□□□□ -1.93
VPS29-202ENST00000447578 C2orf50Q96LR7 162 aa3□□□□□ -1.93
VPS29-202ENST00000447578 ZNF75AQ96N20 296 aa3□□□□□ -1.93
VPS29-202ENST00000447578 CMSS1Q9BQ75 279 aaKnown RBP3□□□□□ -1.93
VPS29-202ENST00000447578 RTBDNQ9BSG5 229 aaPredicted RBP3□□□□□ -1.93
VPS29-202ENST00000447578 HDHD3Q9BSH5 251 aaPredicted RBP3□□□□□ -1.93
VPS29-202ENST00000447578 NMES1Q9C002 83 aa3□□□□□ -1.93
VPS29-202ENST00000447578 OR2H1Q9GZK4 316 aa3□□□□□ -1.93
VPS29-202ENST00000447578 METTL8Q9H825 291 aaKnown RBP3□□□□□ -1.93
VPS29-202ENST00000447578 ASF1BQ9NVP2 202 aa3□□□□□ -1.93
VPS29-202ENST00000447578 PLEKHJ1Q9NW61 149 aa3□□□□□ -1.93
VPS29-202ENST00000447578 RASL12Q9NYN1 266 aa3□□□□□ -1.93
VPS29-202ENST00000447578 GSKIPQ9P0R6 139 aa3□□□□□ -1.93
VPS29-202ENST00000447578 SHPKQ9UHJ6 478 aa3□□□□□ -1.93
VPS29-202ENST00000447578 AK3Q9UIJ7 227 aa3□□□□□ -1.93
VPS29-202ENST00000447578 TP53TG3Q9ULZ0 132 aa3□□□□□ -1.93
VPS29-202ENST00000447578 BOKQ9UMX3 212 aaPredicted RBP3□□□□□ -1.93
VPS29-202ENST00000447578 SLC7A11Q9UPY5 501 aa3□□□□□ -1.93
VPS29-202ENST00000447578 ZNF256Q9Y2P7 627 aaPredicted RBP3□□□□□ -1.93
VPS29-202ENST00000447578 MYO10Q9HD67 2058 aa3□□□□□ -1.93
VPS29-202ENST00000447578 HCFC1P51610 2035 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 HEATR5AQ86XA9 2040 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 IGKV1-27A0A075B6S5 117 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 IGKV1-12A0A0C4DH73 117 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 A0A0J9YXY3 114 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 LOC105371267A0A1B0GV96 52 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 OR6C6A6NF89 314 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 ZNF850A8MQ14 1090 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 LYRM9A8MSI8 78 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 FAM166BA8MTA8 275 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 CEACAM18A8MTB9 384 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 KRBOX1C9JBD0 128 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 SIVA1O15304 175 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 RRP8O43159 456 aaKnown RBP2.99□□□□□ -1.93
VPS29-202ENST00000447578 MRPL33O75394 65 aaKnown RBP2.99□□□□□ -1.93
VPS29-202ENST00000447578 CA11O75493 328 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 FARS2O95363 451 aaKnown RBP2.99□□□□□ -1.93
VPS29-202ENST00000447578 IGKV1D-12P01611 117 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 CTSDP07339 412 aaPredicted RBP2.99□□□□□ -1.93
VPS29-202ENST00000447578 TPT1P13693 172 aaKnown RBP2.99□□□□□ -1.93
VPS29-202ENST00000447578 CTRB1P17538 263 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 CCNOP22674 350 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 CD82P27701 267 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 OPRM1P35372 400 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 RBMXP38159 391 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms