RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 CRXO43186 299 aaPredicted RBP7.24□□□□□ -1.25
PTPN3-204ENST00000446349 CEACAM4O75871 244 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 TEX45Q8NA69 505 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 HDHD3Q9BSH5 251 aaPredicted RBP7.24□□□□□ -1.25
PTPN3-204ENST00000446349 C5orf52A6NGY3 159 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 OR4C46A6NHA9 309 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 IGKV1D-33P01593 117 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 IGKV1-33P01594 117 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 RFPL3SP0C7P2 107 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 FABP4P15090 132 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.24□□□□□ -1.25
PTPN3-204ENST00000446349 M0R1W7 72 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 APELAP0DMC3 54 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 LINC01590Q5TEZ4 76 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 DPH3Q96FX2 82 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 TMEM133Q9H2Q1 129 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 MIXL1Q9H2W2 232 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 SDF2L1Q9HCN8 221 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 NUDT3O95989 172 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 PRSS2P07478 247 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 GLIPR1P48060 266 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 TPRX1Q8N7U7 411 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 FBXL7Q9UJT9 491 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 TBL2Q9Y4P3 447 aaKnown RBP7.23□□□□□ -1.25
PTPN3-204ENST00000446349 J3KRW8 73 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 PTPRDP23468 1912 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 CXorf65A6NEN9 183 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 CBY3A6NI87 242 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 RBFOX2O43251 390 aaKnown RBP eCLIP7.23□□□□□ -1.25
PTPN3-204ENST00000446349 TCTAP57738 103 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 JOSD1Q15040 202 aaPredicted RBP7.23□□□□□ -1.25
PTPN3-204ENST00000446349 COLCA1Q6ZS62 124 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 DRAM1Q8N682 238 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 NPDC1Q9NQX5 325 aaPredicted RBP7.23□□□□□ -1.25
PTPN3-204ENST00000446349 ALPK2Q86TB3 2170 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 THSD7BQ9C0I4 1608 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 PROB1E7EW31 1015 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 MFAP2P55001 183 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 CLEC12BQ2HXU8 276 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 SEMA5BQ9P283 1151 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 TCRBV4S1A1TA0A5B7 111 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 PQLC2LA1A4F0 135 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 UNC119Q13432 240 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 STHQ8IWL8 128 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 IL4P05112 153 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 PSG7Q13046 419 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 RBM38Q9H0Z9 239 aaKnown RBP7.23□□□□□ -1.25
PTPN3-204ENST00000446349 RLFQ13129 1914 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 OR4C5Q8NGB2 326 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 OR13A1Q8NGR1 328 aa7.23□□□□□ -1.25
PTPN3-204ENST00000446349 CD74P04233 296 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 SPNP16150 400 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 PLAURQ03405 335 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 EGR4Q05215 589 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 LINC00114Q6XXX2 140 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 TNFRSF18Q9Y5U5 241 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 ANAPC1Q9H1A4 1944 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 PMCHL1Q16048 86 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 TMEM88Q6PEY1 159 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 LRRC75AQ8NAA5 344 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 SSC4DQ8WTU2 575 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 GPR146Q96CH1 333 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 IL36RNQ9UBH0 155 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 H3BRM9 83 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 SPINK4O60575 86 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 CD69Q07108 199 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 DYRK2Q92630 601 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 FMC1Q96HJ9 113 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 PRELID3AQ96N28 172 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 ZNF324O75467 553 aaPredicted RBP7.22□□□□□ -1.25
PTPN3-204ENST00000446349 RCC1P18754 421 aaPredicted RBP7.22□□□□□ -1.25
PTPN3-204ENST00000446349 MRAP2Q96G30 205 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 PMCHL2Q9BQD1 86 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 H3BQ15 152 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 IL6RP08887 468 aaPredicted RBP7.22□□□□□ -1.25
PTPN3-204ENST00000446349 EFNB2P52799 333 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 GLRX5Q86SX6 157 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 PPP1R3EQ9H7J1 279 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 IGHV3OR16-12A0A075B7B8 117 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 TRAV39A0A0B4J263 110 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 HLA-DQB1P01920 261 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 HKR1P10072 659 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 IFI27L2Q9H2X8 130 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 TMEM250H0YL14 139 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 ZNF56Q15929 161 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 ASPHD2Q6ICH7 369 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 TMEM167AQ8TBQ9 72 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 ASCL2Q99929 193 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 KCNE5Q9UJ90 142 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 ZNF257Q9Y2Q1 563 aa7.22□□□□□ -1.25
PTPN3-204ENST00000446349 AMY1AP04745 511 aa7.21□□□□□ -1.25
PTPN3-204ENST00000446349 ADIPOQQ15848 244 aa7.21□□□□□ -1.25
PTPN3-204ENST00000446349 OR10AG1Q8NH19 301 aa7.21□□□□□ -1.25
PTPN3-204ENST00000446349 FBLN5Q9UBX5 448 aa7.21□□□□□ -1.25
PTPN3-204ENST00000446349 PTBP3O95758 552 aaKnown RBP7.21□□□□□ -1.25
PTPN3-204ENST00000446349 CSRP3P50461 194 aa7.21□□□□□ -1.25
PTPN3-204ENST00000446349 CACNA1BQ00975 2339 aa7.21□□□□□ -1.25
PTPN3-204ENST00000446349 NABP2Q9BQ15 211 aa7.21□□□□□ -1.25
PTPN3-204ENST00000446349 PHOX2AO14813 284 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 SPINK2P20155 84 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms