RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 DHRS13Q6UX07 377 aa11.76□□□□□ -0.53
ERCC3-203ENST00000445889 OR2Z1Q8NG97 314 aa11.76□□□□□ -0.53
ERCC3-203ENST00000445889 OR1L6Q8NGR2 347 aa11.76□□□□□ -0.53
ERCC3-203ENST00000445889 TMEM208Q9BTX3 173 aa11.76□□□□□ -0.53
ERCC3-203ENST00000445889 ZNRD1Q9P1U0 126 aa11.76□□□□□ -0.53
ERCC3-203ENST00000445889 KALRNO60229 2985 aa11.76□□□□□ -0.53
ERCC3-203ENST00000445889 GFRA3O60609 400 aa11.76□□□□□ -0.53
ERCC3-203ENST00000445889 TFPI2P48307 235 aa11.76□□□□□ -0.53
ERCC3-203ENST00000445889 DOLPP1Q86YN1 238 aa11.76□□□□□ -0.53
ERCC3-203ENST00000445889 OR8I2Q8N0Y5 310 aa11.76□□□□□ -0.53
ERCC3-203ENST00000445889 FAM216AQ8WUB2 273 aa11.76□□□□□ -0.53
ERCC3-203ENST00000445889 SPRY4Q9C004 299 aa11.76□□□□□ -0.53
ERCC3-203ENST00000445889 HES4Q9HCC6 221 aa11.76□□□□□ -0.53
ERCC3-203ENST00000445889 GVINP1Q7Z2Y8 2422 aa11.75□□□□□ -0.53
ERCC3-203ENST00000445889 SNURFLB1AK76 121 aa11.75□□□□□ -0.53
ERCC3-203ENST00000445889 SPINT2O43291 252 aa11.75□□□□□ -0.53
ERCC3-203ENST00000445889 PRDX2P32119 198 aa11.75□□□□□ -0.53
ERCC3-203ENST00000445889 TPPP2P59282 170 aa11.75□□□□□ -0.53
ERCC3-203ENST00000445889 ARSJQ5FYB0 599 aaPredicted RBP11.75□□□□□ -0.53
ERCC3-203ENST00000445889 TPTE2P1Q5T6R2 138 aa11.75□□□□□ -0.53
ERCC3-203ENST00000445889 VHLLQ6RSH7 139 aa11.75□□□□□ -0.53
ERCC3-203ENST00000445889 DIRC2Q96SL1 478 aa11.75□□□□□ -0.53
ERCC3-203ENST00000445889 HSD17B10Q99714 261 aaKnown RBP11.75□□□□□ -0.53
ERCC3-203ENST00000445889 RNASE7Q9H1E1 156 aaKnown RBP11.75□□□□□ -0.53
ERCC3-203ENST00000445889 STAG3L2P0CL84 134 aa11.75□□□□□ -0.53
ERCC3-203ENST00000445889 STAG3L3P0CL85 134 aa11.75□□□□□ -0.53
ERCC3-203ENST00000445889 KRTDAPP60985 99 aa11.75□□□□□ -0.53
ERCC3-203ENST00000445889 SRSF6Q13247 344 aaKnown RBP11.75□□□□□ -0.53
ERCC3-203ENST00000445889 NHLRC2Q8NBF2 726 aa11.75□□□□□ -0.53
ERCC3-203ENST00000445889 TMEM140Q9NV12 185 aa11.75□□□□□ -0.53
ERCC3-203ENST00000445889 CNOT1A5YKK6 2376 aaKnown RBP11.74□□□□□ -0.53
ERCC3-203ENST00000445889 C15orf65H3BRN8 121 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 CXorf1O96002 111 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 IL6RP08887 468 aaPredicted RBP11.74□□□□□ -0.53
ERCC3-203ENST00000445889 OR10J4P0C629 311 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 IGFBP2P18065 325 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 ACP1P24666 158 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 TNFSF10P50591 281 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 EFNB3Q15768 340 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 GABRA6Q16445 453 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 DUX4L9Q6RFH8 374 aaPredicted RBP11.74□□□□□ -0.53
ERCC3-203ENST00000445889 MIR17HGQ75NE6 70 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 STPG3Q8N7X2 389 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 OR5AU1Q8NGC0 362 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 KLF13Q9Y2Y9 288 aaPredicted RBP11.74□□□□□ -0.53
ERCC3-203ENST00000445889 CSMD1Q96PZ7 3565 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 ABCA1O95477 2261 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 TDGF1P13385 188 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 YPEL3P61236 119 aaPredicted RBP11.74□□□□□ -0.53
ERCC3-203ENST00000445889 MORN2Q502X0 79 aa11.74□□□□□ -0.53
ERCC3-203ENST00000445889 CA1P00915 261 aaPredicted RBP11.73□□□□□ -0.53
ERCC3-203ENST00000445889 RPLP1P05386 114 aaKnown RBP11.73□□□□□ -0.53
ERCC3-203ENST00000445889 CRYBB3P26998 211 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 GCHFRP30047 84 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 OPRK1P41145 380 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 ST6GALNAC3Q8NDV1 305 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 RAB1CQ92928 201 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 LRFN3Q9BTN0 628 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 VAMP8Q9BV40 100 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 GCM1Q9NP62 436 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 TCF19Q9Y242 345 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 YPEL1O60688 119 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 CECR9P0C854 216 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 CD46P15529 392 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 VDAC2P45880 294 aaPredicted RBP11.73□□□□□ -0.53
ERCC3-203ENST00000445889 RELBQ01201 579 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 TRIP6Q15654 476 aaKnown RBP11.73□□□□□ -0.53
ERCC3-203ENST00000445889 TMEM164Q5U3C3 297 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 C1orf210Q8IVY1 113 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 MDS2Q8NDY4 140 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 DEFB108BQ8NET1 73 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 YPEL2Q96QA6 119 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 IL36BQ9NZH7 164 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 IGKV1D-17A0A075B6S4 117 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 TNFSF15O95150 251 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 MSMPQ1L6U9 139 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 MMD2Q8IY49 270 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 S1PR3Q99500 378 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 CXXC4Q9H2H0 198 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 GOLT1BQ9Y3E0 138 aa11.73□□□□□ -0.53
ERCC3-203ENST00000445889 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.72□□□□□ -0.53
ERCC3-203ENST00000445889 IGHV3-48P01763 117 aa11.72□□□□□ -0.53
ERCC3-203ENST00000445889 ERVK-16P61578 105 aa11.72□□□□□ -0.53
ERCC3-203ENST00000445889 HTD2P86397 168 aa11.72□□□□□ -0.53
ERCC3-203ENST00000445889 PSG5Q15238 335 aa11.72□□□□□ -0.53
ERCC3-203ENST00000445889 PQLC2Q6ZP29 291 aa11.72□□□□□ -0.53
ERCC3-203ENST00000445889 INTS1Q8N201 2190 aaKnown RBP11.72□□□□□ -0.53
ERCC3-203ENST00000445889 LNP1A1A4G5 178 aa11.72□□□□□ -0.53
ERCC3-203ENST00000445889 GNG10P50151 68 aa11.72□□□□□ -0.53
ERCC3-203ENST00000445889 SMIM21Q3B7S5 101 aa11.72□□□□□ -0.53
ERCC3-203ENST00000445889 BTF3L4Q96K17 158 aa11.72□□□□□ -0.53
ERCC3-203ENST00000445889 CDX2Q99626 313 aaPredicted RBP11.72□□□□□ -0.53
ERCC3-203ENST00000445889 MIEN1Q9BRT3 115 aa11.72□□□□□ -0.53
ERCC3-203ENST00000445889 NAT8BQ9UHF3 227 aa11.72□□□□□ -0.53
ERCC3-203ENST00000445889 TECTAO75443 2155 aa11.72□□□□□ -0.53
ERCC3-203ENST00000445889 PLCE1Q9P212 2302 aa11.71□□□□□ -0.53
ERCC3-203ENST00000445889 DLEU1O43261 78 aa11.71□□□□□ -0.53
ERCC3-203ENST00000445889 TNFSF13O75888 250 aa11.71□□□□□ -0.53
ERCC3-203ENST00000445889 CA2P00918 260 aa11.71□□□□□ -0.53
ERCC3-203ENST00000445889 PMCHP20382 165 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms