RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 OR5B3Q8NH48 314 aa15.33■□□□□ 0.04
SEMA3D-202ENST00000444867 WDR83OSQ9Y284 106 aa15.33■□□□□ 0.04
SEMA3D-202ENST00000444867 NBASA2RRP1 2371 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 RBFOX3A6NFN3 312 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 PRSS46E5RG02 174 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 IGLV1-47P01700 117 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 LIPFP07098 398 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 IGFBP2P18065 325 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 CD1BP29016 333 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 CCL20P78556 96 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 ZNF843Q8N446 348 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 SLC24A4Q8NFF2 622 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 CLEC7AQ9BXN2 247 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 NPCDR1Q9BY65 106 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 PLEKHA3Q9HB20 300 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 PATZ1Q9HBE1 687 aaKnown RBP15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 RRHO14718 337 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 USF1P22415 310 aaPredicted RBP15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 NPY1RP25929 384 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 REG1BP48304 166 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 PPT1P50897 306 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 RPS16P62249 146 aaKnown RBP15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 HLA-DRB5Q30154 266 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 TMEM167AQ8TBQ9 72 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 SLC35B3Q9H1N7 401 aa15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 AMMECR1Q9Y4X0 333 aaPredicted RBP15.32■□□□□ 0.04
SEMA3D-202ENST00000444867 A0A1B0GV50 99 aa15.31■□□□□ 0.04
SEMA3D-202ENST00000444867 A0A1W2PPR1 153 aa15.31■□□□□ 0.04
SEMA3D-202ENST00000444867 GOSR1O95249 250 aa15.31■□□□□ 0.04
SEMA3D-202ENST00000444867 RCC1LQ96I51 464 aaKnown RBP15.31■□□□□ 0.04
SEMA3D-202ENST00000444867 VSIRQ9H7M9 311 aa15.31■□□□□ 0.04
SEMA3D-202ENST00000444867 ABCA4P78363 2273 aa15.31■□□□□ 0.04
SEMA3D-202ENST00000444867 TEX50A0A1B0GTY4 177 aa15.3■□□□□ 0.04
SEMA3D-202ENST00000444867 A6NNC1 897 aa15.3■□□□□ 0.04
SEMA3D-202ENST00000444867 FNDC10F2Z333 226 aa15.3■□□□□ 0.04
SEMA3D-202ENST00000444867 LY6HO94772 140 aa15.3■□□□□ 0.04
SEMA3D-202ENST00000444867 IFNA4P05014 189 aa15.3■□□□□ 0.04
SEMA3D-202ENST00000444867 ELLP55199 621 aaPredicted RBP15.3■□□□□ 0.04
SEMA3D-202ENST00000444867 DIAPH2-AS1Q14236 149 aa15.3■□□□□ 0.04
SEMA3D-202ENST00000444867 ZNF506Q5JVG8 444 aa15.3■□□□□ 0.04
SEMA3D-202ENST00000444867 ZNF787Q6DD87 383 aa15.3■□□□□ 0.04
SEMA3D-202ENST00000444867 TMEM170AQ8WVE7 144 aa15.3■□□□□ 0.04
SEMA3D-202ENST00000444867 INS-IGF2F8WCM5 200 aa15.29■□□□□ 0.04
SEMA3D-202ENST00000444867 LGALS7P47929 136 aa15.29■□□□□ 0.04
SEMA3D-202ENST00000444867 RPL8P62917 257 aaKnown RBP15.29■□□□□ 0.04
SEMA3D-202ENST00000444867 PMS2P11Q13670 270 aa15.29■□□□□ 0.04
SEMA3D-202ENST00000444867 ZNF726P1Q15940 193 aa15.29■□□□□ 0.04
SEMA3D-202ENST00000444867 ACSM6Q6P461 480 aa15.29■□□□□ 0.04
SEMA3D-202ENST00000444867 CLDND2Q8NHS1 167 aa15.29■□□□□ 0.04
SEMA3D-202ENST00000444867 UNKLQ9H9P5 680 aaKnown RBP15.29■□□□□ 0.04
SEMA3D-202ENST00000444867 UBTD1Q9HAC8 227 aa15.29■□□□□ 0.04
SEMA3D-202ENST00000444867 TMA7Q9Y2S6 64 aaKnown RBP15.29■□□□□ 0.04
SEMA3D-202ENST00000444867 BUB1B-PAK6H3BSN5 160 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 C19orf84I3L1E1 186 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 M0R1W7 72 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 DNASE2O00115 360 aaPredicted RBP15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 F12P00748 615 aaPredicted RBP15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 HSPB1P04792 205 aaKnown RBP15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 VMA21Q3ZAQ7 101 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 KHDC3LQ587J8 217 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 FFAR4Q5NUL3 377 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 OR1L8Q8NGR8 309 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 SSBP3Q9BWW4 388 aaPredicted RBP15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 HINT2Q9BX68 163 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 COMMD5Q9GZQ3 224 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 MALRD1Q5VYJ5 2156 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 CTXND1A0A1B0GTU2 59 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 C22orf46C9J442 243 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 CA2P00918 260 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 GPR6P46095 362 aaPredicted RBP15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 NPVFQ9HCQ7 196 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 KCNIP2Q9NS61 270 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 SLC39A9Q9NUM3 307 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 ONECUT1Q9UBC0 465 aa15.28■□□□□ 0.04
SEMA3D-202ENST00000444867 ZNF462Q96JM2 2506 aa15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 MAP1LC3B2A6NCE7 125 aa15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 IGLV2-23P01705 113 aa15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 MYOD1P15172 320 aa15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 EFNA4P52798 201 aa15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 BSXQ3C1V8 233 aa15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 ACOT6Q3I5F7 207 aaPredicted RBP15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 C2orf83Q53S99 150 aa15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 LCN15Q6UWW0 184 aa15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 TREML4Q6UXN2 200 aa15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 RPP25LQ8N5L8 163 aaKnown RBP15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 CLRN3Q8NCR9 226 aa15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 RARRES2Q99969 163 aa15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 ACTR3CQ9C0K3 210 aaPredicted RBP15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 MAP1LC3BQ9GZQ8 125 aa15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 NDUFA4L2Q9NRX3 87 aa15.27■□□□□ 0.03
SEMA3D-202ENST00000444867 LOC105371242A0A075B767 164 aa15.26■□□□□ 0.03
SEMA3D-202ENST00000444867 LOC102723971A0A1B0GUV8 181 aa15.26■□□□□ 0.03
SEMA3D-202ENST00000444867 A0A1W2PN81 502 aa15.26■□□□□ 0.03
SEMA3D-202ENST00000444867 SMCO3A2RU48 225 aa15.26■□□□□ 0.03
SEMA3D-202ENST00000444867 IFNA1P01562 189 aa15.26■□□□□ 0.03
SEMA3D-202ENST00000444867 CHRNA7P36544 502 aa15.26■□□□□ 0.03
SEMA3D-202ENST00000444867 OPRK1P41145 380 aa15.26■□□□□ 0.03
SEMA3D-202ENST00000444867 ICAM4Q14773 271 aa15.26■□□□□ 0.03
SEMA3D-202ENST00000444867 HAGHQ16775 308 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms