RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 TRIM63Q969Q1 353 aa13.57□□□□□ -0.24
SMARCAL1-209ENST00000444508 DUX3Q96PT4 197 aa13.57□□□□□ -0.24
SMARCAL1-209ENST00000444508 COMMD5Q9GZQ3 224 aa13.57□□□□□ -0.24
SMARCAL1-209ENST00000444508 SLC2A8Q9NY64 477 aa13.57□□□□□ -0.24
SMARCAL1-209ENST00000444508 NOTCH3Q9UM47 2321 aa13.57□□□□□ -0.24
SMARCAL1-209ENST00000444508 H0Y980 276 aa13.56□□□□□ -0.24
SMARCAL1-209ENST00000444508 I3L521 148 aa13.56□□□□□ -0.24
SMARCAL1-209ENST00000444508 FGF2P09038 288 aa13.56□□□□□ -0.24
SMARCAL1-209ENST00000444508 G6PCP35575 357 aa13.56□□□□□ -0.24
SMARCAL1-209ENST00000444508 RAB25P57735 213 aa13.56□□□□□ -0.24
SMARCAL1-209ENST00000444508 RUNX1Q01196 453 aa13.56□□□□□ -0.24
SMARCAL1-209ENST00000444508 SLC25A42Q86VD7 318 aa13.56□□□□□ -0.24
SMARCAL1-209ENST00000444508 MRGPRFQ96AM1 343 aa13.56□□□□□ -0.24
SMARCAL1-209ENST00000444508 SCGB3A2Q96PL1 93 aa13.56□□□□□ -0.24
SMARCAL1-209ENST00000444508 P2RX4Q99571 388 aa13.56□□□□□ -0.24
SMARCAL1-209ENST00000444508 TRAV3A0A0B4J244 114 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 A0A0G2JLM5 398 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 C3orf85A0A1B0GTC6 90 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 C13orf42A0A1B0GVH6 325 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 HMX3A6NHT5 357 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 TEX22C9J3V5 150 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 SNAPC5O75971 98 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 BRI3O95415 125 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 IL6RP08887 468 aaPredicted RBP13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 LGALS1P09382 135 aaKnown RBP13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 INPP1P49441 399 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 KLF9Q13886 244 aaPredicted RBP13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 CADM3Q8N126 398 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 TTC9CQ8N5M4 171 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 ADAD2Q8NCV1 583 aaKnown RBP13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 OR11H1Q8NG94 326 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 OR1N2Q8NGR9 330 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 RCC1LQ96I51 464 aaKnown RBP13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 TSC22D3Q99576 134 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 SRRQ9GZT4 340 aa13.55□□□□□ -0.24
SMARCAL1-209ENST00000444508 G3V4G9 280 aa13.54□□□□□ -0.24
SMARCAL1-209ENST00000444508 B3GALNT1O75752 331 aa13.54□□□□□ -0.24
SMARCAL1-209ENST00000444508 ATG12O94817 140 aa13.54□□□□□ -0.24
SMARCAL1-209ENST00000444508 IGHV3-11P01762 117 aa13.54□□□□□ -0.24
SMARCAL1-209ENST00000444508 MYOD1P15172 320 aa13.54□□□□□ -0.24
SMARCAL1-209ENST00000444508 OR2B8PP59922 312 aa13.54□□□□□ -0.24
SMARCAL1-209ENST00000444508 H2BFWTQ7Z2G1 175 aa13.54□□□□□ -0.24
SMARCAL1-209ENST00000444508 GDPD1Q8N9F7 314 aa13.54□□□□□ -0.24
SMARCAL1-209ENST00000444508 DEDD2Q8WXF8 326 aa13.54□□□□□ -0.24
SMARCAL1-209ENST00000444508 DPF1Q92782 380 aa13.54□□□□□ -0.24
SMARCAL1-209ENST00000444508 TP53RKQ96S44 253 aa13.54□□□□□ -0.24
SMARCAL1-209ENST00000444508 ZNF257Q9Y2Q1 563 aa13.54□□□□□ -0.24
SMARCAL1-209ENST00000444508 TEX13DA0A0J9YY54 714 aaPredicted RBP13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 E7EUB6 86 aa13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 DUS4LO95620 317 aaKnown RBP13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 DHFRP00374 187 aa13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 OR8U8P0C7N1 319 aa13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 IGLL1P15814 213 aa13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 ZNF616Q08AN1 781 aa13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 TRIM16LQ309B1 348 aa13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 TRIQKQ629K1 86 aa13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 ZNF57Q68EA5 555 aaPredicted RBP13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 C1QL4Q86Z23 238 aa13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 SEC22AQ96IW7 307 aa13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 USMG5Q96IX5 58 aa13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 RTBDNQ9BSG5 229 aaPredicted RBP13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 MCRIP2Q9BUT9 160 aaKnown RBP13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 QTRT1Q9BXR0 403 aaKnown RBP13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 ALX4Q9H161 411 aaPredicted RBP13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 C5orf66Q9H5L9 145 aa13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 PRNDQ9UKY0 176 aa13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 GPR132Q9UNW8 380 aa13.53□□□□□ -0.24
SMARCAL1-209ENST00000444508 NPIPB5A8MRT5 1133 aa13.52□□□□□ -0.25
SMARCAL1-209ENST00000444508 IGKV1-39P01597 117 aa13.52□□□□□ -0.25
SMARCAL1-209ENST00000444508 IGKV1D-39P04432 117 aa13.52□□□□□ -0.25
SMARCAL1-209ENST00000444508 FHL3Q13643 280 aa13.52□□□□□ -0.25
SMARCAL1-209ENST00000444508 OXLD1Q5BKU9 147 aa13.52□□□□□ -0.25
SMARCAL1-209ENST00000444508 SAMD5Q5TGI4 173 aa13.52□□□□□ -0.25
SMARCAL1-209ENST00000444508 THOC7Q6I9Y2 204 aaKnown RBP13.52□□□□□ -0.25
SMARCAL1-209ENST00000444508 GPR61Q9BZJ8 451 aa13.52□□□□□ -0.25
SMARCAL1-209ENST00000444508 NAA60Q9H7X0 242 aa13.52□□□□□ -0.25
SMARCAL1-209ENST00000444508 FKBP11Q9NYL4 201 aa13.52□□□□□ -0.25
SMARCAL1-209ENST00000444508 NSG2Q9Y328 171 aa13.52□□□□□ -0.25
SMARCAL1-209ENST00000444508 OR51B2Q9Y5P1 312 aa13.52□□□□□ -0.25
SMARCAL1-209ENST00000444508 TEX50A0A1B0GTY4 177 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 A0A1B0GW64 132 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 A6NHS1 94 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 FAM223BA6NKX1 122 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 LINC01619G3V211 115 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 PRH1P02810 166 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 TRAPPC2P0DI81 140 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 TRAPPC2BP0DI82 140 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 AREGP15514 252 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 PSMB6P28072 239 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 AKR1C2P52895 323 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 RHOGP84095 191 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 ZNF45Q02386 682 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 SP6Q3SY56 376 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 FAM223AQ8IWN6 122 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 OR1L8Q8NGR8 309 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 OR4A16Q8NH70 328 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 SRSF8Q9BRL6 282 aaKnown RBP13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 HINT2Q9BX68 163 aa13.51□□□□□ -0.25
SMARCAL1-209ENST00000444508 CRYM-AS1A6NIL9 109 aa13.5□□□□□ -0.25
SMARCAL1-209ENST00000444508 C15orf61A6NNL5 157 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms