RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 COTL1Q14019 142 aa9.73□□□□□ -0.85
HCFC1-203ENST00000444191 RPEL1Q2QD12 228 aa9.73□□□□□ -0.85
HCFC1-203ENST00000444191 RNF138Q8WVD3 245 aa9.73□□□□□ -0.85
HCFC1-203ENST00000444191 CXXC4Q9H2H0 198 aa9.73□□□□□ -0.85
HCFC1-203ENST00000444191 CREBBPQ92793 2442 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 C9orf172C9J069 976 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 DIRC3C9JPN6 131 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 DLEU1O43261 78 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 MRPS11P82912 194 aaKnown RBP9.72□□□□□ -0.85
HCFC1-203ENST00000444191 ZFP36L1Q07352 338 aaKnown RBP9.72□□□□□ -0.85
HCFC1-203ENST00000444191 HLA-DRB5Q30154 266 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 TEPPQ6URK8 271 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 LINC00596Q86U02 117 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 ARL6IP6Q8N6S5 226 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 COMMD5Q9GZQ3 224 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 SEPSECSQ9HD40 501 aaKnown RBP9.72□□□□□ -0.85
HCFC1-203ENST00000444191 MKRN2OSH3BPM6 223 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 NKX2-8O15522 239 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 CXorf1O96002 111 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 IGFBP2P18065 325 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 RND2P52198 227 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 TMEM183BQ1AE95 376 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 ARSJQ5FYB0 599 aaPredicted RBP9.72□□□□□ -0.85
HCFC1-203ENST00000444191 TMEM14EPQ6UXP3 125 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 COLCA1Q6ZS62 124 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 MOB3BQ86TA1 216 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 STARD4Q96DR4 205 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 SH2D2AQ9NP31 389 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 TCF19Q9Y242 345 aa9.72□□□□□ -0.85
HCFC1-203ENST00000444191 NUPR1O60356 82 aa9.71□□□□□ -0.85
HCFC1-203ENST00000444191 RPLP1P05386 114 aaKnown RBP9.71□□□□□ -0.85
HCFC1-203ENST00000444191 FOXF2Q12947 444 aa9.71□□□□□ -0.85
HCFC1-203ENST00000444191 MMD2Q8IY49 270 aa9.71□□□□□ -0.85
HCFC1-203ENST00000444191 ZNF295-AS1Q8N0V1 137 aa9.71□□□□□ -0.85
HCFC1-203ENST00000444191 STPG3Q8N7X2 389 aa9.71□□□□□ -0.85
HCFC1-203ENST00000444191 BCL2L2Q92843 193 aaPredicted RBP9.71□□□□□ -0.85
HCFC1-203ENST00000444191 HSPB7Q9UBY9 170 aa9.71□□□□□ -0.85
HCFC1-203ENST00000444191 TANC2Q9HCD6 1990 aa9.71□□□□□ -0.85
HCFC1-203ENST00000444191 NOTCH3Q9UM47 2321 aa9.71□□□□□ -0.85
HCFC1-203ENST00000444191 ORM2P19652 201 aa9.71□□□□□ -0.85
HCFC1-203ENST00000444191 IGHV1-2P23083 117 aa9.71□□□□□ -0.85
HCFC1-203ENST00000444191 SRP14P37108 136 aaKnown RBP9.71□□□□□ -0.85
HCFC1-203ENST00000444191 HNRNPA3P51991 378 aaKnown RBP9.71□□□□□ -0.85
HCFC1-203ENST00000444191 MLANAQ16655 118 aa9.71□□□□□ -0.85
HCFC1-203ENST00000444191 Q56UQ5 140 aa9.71□□□□□ -0.85
HCFC1-203ENST00000444191 TECRQ9NZ01 308 aaKnown RBP9.71□□□□□ -0.85
HCFC1-203ENST00000444191 A0A1W2PRD5 423 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 A0A1W2PRF3 423 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 A0A1W2PRM7 423 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 B4E171 279 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 RAB29O14966 203 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 TMPRSS2O15393 492 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 RBFOX2O43251 390 aaKnown RBP eCLIP9.71□□□□□ -0.86
HCFC1-203ENST00000444191 SRIP30626 198 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 TSPAN7P41732 249 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 DEFB109BQ30KR1 87 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 MIR17HGQ75NE6 70 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 SLC24A4Q8NFF2 622 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 OR5B3Q8NH48 314 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 TMEM45BQ96B21 275 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 OR2V2Q96R30 315 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 LINC00470Q9BZP3 86 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 NPVFQ9HCQ7 196 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 WIPI2Q9Y4P8 454 aa9.71□□□□□ -0.86
HCFC1-203ENST00000444191 LOC102724200A0A096LPH7 203 aaPredicted RBP9.7□□□□□ -0.86
HCFC1-203ENST00000444191 FAM90A26D6RGX4 464 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 J3QR06 171 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 CSN3P07498 182 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 TIMP3P35625 211 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 UBE2L3P68036 154 aaKnown RBP9.7□□□□□ -0.86
HCFC1-203ENST00000444191 STUMQ69YW2 141 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 ZCCHC24Q8N2G6 241 aaKnown RBP9.7□□□□□ -0.86
HCFC1-203ENST00000444191 CCL13Q99616 98 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 CDX2Q99626 313 aaPredicted RBP9.7□□□□□ -0.86
HCFC1-203ENST00000444191 ZNRD1Q9P1U0 126 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 ARL2-SNX15V9GYD0 113 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 BOD1L1Q8NFC6 3051 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 IGHV3-72A0A0B4J1Y9 119 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 SIAH2O43255 324 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 GCHFRP30047 84 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 OPRK1P41145 380 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 HINT1P49773 126 aaPredicted RBP9.7□□□□□ -0.86
HCFC1-203ENST00000444191 RANP62826 216 aaKnown RBP9.7□□□□□ -0.86
HCFC1-203ENST00000444191 CCL8P80075 99 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 DAZAP2Q15038 168 aaPredicted RBP9.7□□□□□ -0.86
HCFC1-203ENST00000444191 TDRG1Q3Y452 100 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 CENPWQ5EE01 88 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 RNFT1Q5M7Z0 435 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 TMEM242Q9NWH2 141 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 CA2P00918 260 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 IL6RP08887 468 aaPredicted RBP9.7□□□□□ -0.86
HCFC1-203ENST00000444191 TNFSF10P50591 281 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 TDGF1P3P51864 188 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 ZNF137PP52743 207 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 MFAP2P55001 183 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 ACP7Q6ZNF0 438 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 OR2D3Q8NGH3 330 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 COQ2Q96H96 371 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 C11orf1Q9H5F2 150 aa9.7□□□□□ -0.86
HCFC1-203ENST00000444191 SELENOKQ9Y6D0 94 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms