RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 SPAG16Q8N0X2 631 aa12.31□□□□□ -0.44
CTDSP1-204ENST00000443891 TSPAN14Q8NG11 270 aa12.31□□□□□ -0.44
CTDSP1-204ENST00000443891 SECTM1Q8WVN6 248 aa12.31□□□□□ -0.44
CTDSP1-204ENST00000443891 MARC2Q969Z3 335 aa12.31□□□□□ -0.44
CTDSP1-204ENST00000443891 PLEKHA3Q9HB20 300 aa12.31□□□□□ -0.44
CTDSP1-204ENST00000443891 IGLV11-55A0A075B6I3 123 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 TRAV25A0A0B4J276 109 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 A0A1B0GW64 132 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 OR11H12B2RN74 326 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 NDUFB8O95169 186 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 CBLN1P23435 193 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 CLEC19AQ6UXS0 136 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 CADM3Q8N126 398 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 OR5AP2Q8NGF4 316 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 SLC25A38Q96DW6 304 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 CCDC140Q96MF4 163 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 ATP6V0BQ99437 205 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 SLC5A7Q9GZV3 580 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 AUNIPQ9H7T9 357 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 PLEKHA2Q9HB19 425 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 CCL28Q9NRJ3 127 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 TENM2Q9NT68 2774 aa12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 DYNC2H1Q8NCM8 4307 aaKnown RBP12.3□□□□□ -0.44
CTDSP1-204ENST00000443891 CD7P09564 240 aa12.29□□□□□ -0.44
CTDSP1-204ENST00000443891 AREGP15514 252 aa12.29□□□□□ -0.44
CTDSP1-204ENST00000443891 ELLP55199 621 aaPredicted RBP12.29□□□□□ -0.44
CTDSP1-204ENST00000443891 OR2B8PP59922 312 aa12.29□□□□□ -0.44
CTDSP1-204ENST00000443891 GUCA2BQ16661 112 aa12.29□□□□□ -0.44
CTDSP1-204ENST00000443891 IDNKQ5T6J7 187 aa12.29□□□□□ -0.44
CTDSP1-204ENST00000443891 ZNF57Q68EA5 555 aaPredicted RBP12.29□□□□□ -0.44
CTDSP1-204ENST00000443891 SSX9Q7RTT3 188 aa12.29□□□□□ -0.44
CTDSP1-204ENST00000443891 GVQW1Q8N7I0 195 aa12.29□□□□□ -0.44
CTDSP1-204ENST00000443891 COMMD5Q9GZQ3 224 aa12.29□□□□□ -0.44
CTDSP1-204ENST00000443891 HRASLSQ9HDD0 168 aa12.29□□□□□ -0.44
CTDSP1-204ENST00000443891 COMMD9Q9P000 198 aa12.29□□□□□ -0.44
CTDSP1-204ENST00000443891 UPK2O00526 184 aa12.28□□□□□ -0.44
CTDSP1-204ENST00000443891 OR5H6Q8NGV6 325 aa12.28□□□□□ -0.44
CTDSP1-204ENST00000443891 SRD5A3Q9H8P0 318 aa12.28□□□□□ -0.44
CTDSP1-204ENST00000443891 MRPL27Q9P0M9 148 aaKnown RBP12.28□□□□□ -0.44
CTDSP1-204ENST00000443891 TMEM213A2RRL7 107 aa12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 RBMY1BA6NDE4 496 aaKnown RBP12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 RBMY1EA6NEQ0 496 aaKnown RBP12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 TNFSF12O43508 249 aa12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 XRCC3O43542 346 aa12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 JTBO76095 146 aa12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 HLA-AP01891 365 aaKnown RBP12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 CLEC3BP05452 202 aa12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 RBMY1DP0C7P1 496 aaKnown RBP12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 C8orf88P0DMB2 117 aa12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 PTBP1P26599 531 aaKnown RBP eCLIP12.27□□□□□ -0.452e-6■■□□□ 12.7
CTDSP1-204ENST00000443891 DHRS11Q6UWP2 260 aa12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 DEFB125Q8N687 156 aa12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 VN1R17PQ8TDU5 208 aa12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 S100A16Q96FQ6 103 aaKnown RBP12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 UFC1Q9Y3C8 167 aa12.27□□□□□ -0.45
CTDSP1-204ENST00000443891 IGLC7A0M8Q6 106 aa12.26□□□□□ -0.45
CTDSP1-204ENST00000443891 ZNF320A2RRD8 509 aa12.26□□□□□ -0.45
CTDSP1-204ENST00000443891 CGB1A6NKQ9 187 aa12.26□□□□□ -0.45
CTDSP1-204ENST00000443891 SULT1C2O00338 296 aa12.26□□□□□ -0.45
CTDSP1-204ENST00000443891 CLEC2LP0C7M8 214 aa12.26□□□□□ -0.45
CTDSP1-204ENST00000443891 MYOD1P15172 320 aa12.26□□□□□ -0.45
CTDSP1-204ENST00000443891 HERV-K104P61576 105 aa12.26□□□□□ -0.45
CTDSP1-204ENST00000443891 ZNF818PQ6ZRF7 136 aa12.26□□□□□ -0.45
CTDSP1-204ENST00000443891 TMEM61Q8N0U2 210 aa12.26□□□□□ -0.45
CTDSP1-204ENST00000443891 UXS1Q8NBZ7 420 aa12.26□□□□□ -0.45
CTDSP1-204ENST00000443891 ZNF502Q8TBZ5 544 aa12.26□□□□□ -0.45
CTDSP1-204ENST00000443891 WDR89Q96FK6 387 aaPredicted RBP12.26□□□□□ -0.45
CTDSP1-204ENST00000443891 QTRT1Q9BXR0 403 aaKnown RBP12.26□□□□□ -0.45
CTDSP1-204ENST00000443891 IGHV3-23P01764 117 aa12.25□□□□□ -0.45
CTDSP1-204ENST00000443891 FXYD4P59646 89 aa12.25□□□□□ -0.45
CTDSP1-204ENST00000443891 ERVK-16P61578 105 aa12.25□□□□□ -0.45
CTDSP1-204ENST00000443891 AADACL3Q5VUY0 350 aa12.25□□□□□ -0.45
CTDSP1-204ENST00000443891 PLET1Q6UQ28 207 aa12.25□□□□□ -0.45
CTDSP1-204ENST00000443891 C19orf35Q6ZS72 473 aa12.25□□□□□ -0.45
CTDSP1-204ENST00000443891 DMBX1Q8NFW5 382 aa12.25□□□□□ -0.45
CTDSP1-204ENST00000443891 OR52B4Q8NGK2 314 aa12.25□□□□□ -0.45
CTDSP1-204ENST00000443891 OR1L6Q8NGR2 347 aa12.25□□□□□ -0.45
CTDSP1-204ENST00000443891 GPHA2Q96T91 129 aa12.25□□□□□ -0.45
CTDSP1-204ENST00000443891 IFT46Q9NQC8 304 aa12.25□□□□□ -0.45
CTDSP1-204ENST00000443891 TMEM140Q9NV12 185 aa12.25□□□□□ -0.45
CTDSP1-204ENST00000443891 MFSD2BA6NFX1 497 aa12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 TRAPPC2P0DI81 140 aa12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 TRAPPC2BP0DI82 140 aa12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 F2RP25116 425 aa12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 GNRHRP30968 328 aa12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 TAS2R46P59540 309 aa12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 SPSB3Q6PJ21 355 aa12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 RBPMS2Q6ZRY4 209 aaKnown RBP12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 CMTM1Q8IZ96 169 aa12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 GDPD1Q8N9F7 314 aa12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 OR1L8Q8NGR8 309 aa12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 ZNF436Q9C0F3 470 aaPredicted RBP12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 RNF167Q9H6Y7 350 aa12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 FAM212BQ9NTI7 297 aaPredicted RBP12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 MLXQ9UH92 298 aa12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 ANAPC10Q9UM13 185 aa12.24□□□□□ -0.45
CTDSP1-204ENST00000443891 RYR2Q92736 4967 aa12.23□□□□□ -0.45
CTDSP1-204ENST00000443891 LOC102724200A0A096LPH7 203 aaPredicted RBP12.23□□□□□ -0.45
CTDSP1-204ENST00000443891 MARCH11A6NNE9 402 aa12.23□□□□□ -0.45
CTDSP1-204ENST00000443891 REG1AP05451 166 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms