RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 IER3P46695 156 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 C2orf88Q9BSF0 95 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 PRSS2P07478 247 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 C8orf88P0DMB2 117 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 C1orf100Q5SVJ3 147 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 KIR2DL4Q99706 377 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 STHQ8IWL8 128 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 VKORC1L1Q8N0U8 176 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 GPR82Q96P67 336 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 C1QTNF5Q9BXJ0 243 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 GEMIN7Q9H840 131 aaKnown RBP9.53□□□□□ -0.88
FN1-211ENST00000443816 IL4P05112 153 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 MFAP2P55001 183 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 SELENOHQ8IZQ5 122 aaKnown RBP9.53□□□□□ -0.88
FN1-211ENST00000443816 PPP1R17O96001 155 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 UNC119Q13432 240 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 IGKV3-20P01619 116 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 RFLNBQ8N5W9 214 aa9.53□□□□□ -0.88
FN1-211ENST00000443816 OR4C46A6NHA9 309 aa9.52□□□□□ -0.88
FN1-211ENST00000443816 CEACAM4O75871 244 aa9.52□□□□□ -0.88
FN1-211ENST00000443816 RSG1Q9BU20 258 aa9.52□□□□□ -0.88
FN1-211ENST00000443816 KBTBD11-OT1A0A1B0GTJ5 212 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 ARL14EPLP0DKL9 152 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 HIST1H1AQ02539 215 aaPredicted RBP9.52□□□□□ -0.89
FN1-211ENST00000443816 ZXDCQ2QGD7 858 aaPredicted RBP9.52□□□□□ -0.89
FN1-211ENST00000443816 MRAP2Q96G30 205 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 TIMP3P35625 211 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 UCP3P55916 312 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 PAPPA-AS1Q5QFB9 102 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 TAF15Q92804 592 aaKnown RBP eCLIP9.52□□□□□ -0.899e-7■■□□□ 12.6
FN1-211ENST00000443816 IGKV1D-42A0A075B6H8 117 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 LOC102723996A0A087X1L8 192 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 NTN3O00634 580 aaPredicted RBP9.52□□□□□ -0.89
FN1-211ENST00000443816 PRSS8Q16651 343 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 OR10D4PQ8NGN7 298 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 DUX3Q96PT4 197 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 MIXL1Q9H2W2 232 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 SAPCD1Q5SSQ6 148 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 TCF24Q7RTU0 167 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 ZNF502Q8TBZ5 544 aa9.52□□□□□ -0.89
FN1-211ENST00000443816 TRBV5-7A0A0A0MS05 114 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 PLAUP00749 431 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 CDKN1AP38936 164 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 FBXL7Q9UJT9 491 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 TCF19Q9Y242 345 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 BCL2P10415 239 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 CXCL3P19876 107 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 SMIM8Q96KF7 97 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 C12orf57Q99622 126 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 KBTBD11O94819 623 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 PTBP3O95758 552 aaKnown RBP9.51□□□□□ -0.89
FN1-211ENST00000443816 ADIPOQQ15848 244 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 TMEM177Q53S58 311 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 C8orf46Q8TAG6 207 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 TBX15Q96SF7 602 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 A0A1W2PP11 408 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 A6NDN8 102 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 ZNF385CQ66K41 422 aaPredicted RBP9.51□□□□□ -0.89
FN1-211ENST00000443816 H3BQ15 152 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 LINC00305Q7Z4B0 112 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 ZNF383Q8NA42 475 aa9.51□□□□□ -0.89
FN1-211ENST00000443816 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.5□□□□□ -0.89
FN1-211ENST00000443816 AWAT1Q58HT5 328 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 NEUROG3Q9Y4Z2 214 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 HINT1P49773 126 aaPredicted RBP9.5□□□□□ -0.89
FN1-211ENST00000443816 ZNF880Q6PDB4 577 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 SPSB4Q96A44 273 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 SPRR3Q9UBC9 169 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 AMY1AP04745 511 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 COX6CP09669 75 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 CMC4P56277 68 aaPredicted RBP9.5□□□□□ -0.89
FN1-211ENST00000443816 PSG7Q13046 419 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 LDLRAD2Q5SZI1 272 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 PEAR1Q5VY43 1037 aaPredicted RBP9.5□□□□□ -0.89
FN1-211ENST00000443816 LEMD1Q68G75 181 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 DRAM1Q8N682 238 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 RNASEH2CQ8TDP1 164 aaKnown RBP9.5□□□□□ -0.89
FN1-211ENST00000443816 AMELYQ99218 206 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 LMX1BO60663 402 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 ASPHD2Q6ICH7 369 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 CYP2G1PQ6ZSU1 146 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 OR11H7Q8NGC8 314 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 VWCEQ96DN2 955 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 ALKBH7Q9BT30 221 aaPredicted RBP9.5□□□□□ -0.89
FN1-211ENST00000443816 FAM74A4Q5TZK3 123 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 FAM166AQ6J272 317 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 FAM3BP58499 235 aaPredicted RBP9.5□□□□□ -0.89
FN1-211ENST00000443816 EGR4Q05215 589 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 MIC13Q5XKP0 118 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 SGK494Q96LW2 274 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 TUBD1Q9UJT1 453 aa9.5□□□□□ -0.89
FN1-211ENST00000443816 PAX1P15863 534 aa9.49□□□□□ -0.89
FN1-211ENST00000443816 RPS11P62280 158 aaKnown RBP eCLIP9.49□□□□□ -0.89
FN1-211ENST00000443816 SGMS2Q8NHU3 365 aa9.49□□□□□ -0.89
FN1-211ENST00000443816 RAB37Q96AX2 223 aa9.49□□□□□ -0.89
FN1-211ENST00000443816 REPIN1Q9BWE0 567 aaKnown RBP9.49□□□□□ -0.89
FN1-211ENST00000443816 FBXL15Q9H469 300 aa9.49□□□□□ -0.89
FN1-211ENST00000443816 TNFRSF18Q9Y5U5 241 aa9.49□□□□□ -0.89
FN1-211ENST00000443816 NDUFB4O95168 129 aa9.49□□□□□ -0.89
FN1-211ENST00000443816 MT-ND6P03923 174 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms