RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 SNAPC5O75971 98 aa9.62□□□□□ -0.87
USP1-203ENST00000442679 MYOD1P15172 320 aa9.62□□□□□ -0.87
USP1-203ENST00000442679 AKR1C4P17516 323 aa9.62□□□□□ -0.87
USP1-203ENST00000442679 RPL27AP46776 148 aaKnown RBP9.62□□□□□ -0.87
USP1-203ENST00000442679 CDX1P47902 265 aaPredicted RBP9.62□□□□□ -0.87
USP1-203ENST00000442679 TRIM16LQ309B1 348 aa9.62□□□□□ -0.87
USP1-203ENST00000442679 TREML4Q6UXN2 200 aa9.62□□□□□ -0.87
USP1-203ENST00000442679 C18orf65Q6ZTR6 163 aa9.62□□□□□ -0.87
USP1-203ENST00000442679 CADM3Q8N126 398 aa9.62□□□□□ -0.87
USP1-203ENST00000442679 OR4F17Q8NGA8 305 aa9.62□□□□□ -0.87
USP1-203ENST00000442679 CASTOR1Q8WTX7 329 aa9.62□□□□□ -0.87
USP1-203ENST00000442679 SEC22AQ96IW7 307 aa9.62□□□□□ -0.87
USP1-203ENST00000442679 MS4A10Q96PG2 267 aa9.62□□□□□ -0.87
USP1-203ENST00000442679 FYTTD1Q96QD9 318 aaKnown RBP9.62□□□□□ -0.87
USP1-203ENST00000442679 OR4F4Q96R69 305 aa9.62□□□□□ -0.87
USP1-203ENST00000442679 SLC25A21Q9BQT8 299 aaPredicted RBP9.62□□□□□ -0.87
USP1-203ENST00000442679 ZNF355PQ9NSJ1 428 aa9.62□□□□□ -0.87
USP1-203ENST00000442679 HMX3A6NHT5 357 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 TEX22C9J3V5 150 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 E7EUB6 86 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 ATG12O94817 140 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 FGF2P09038 288 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 OR5AC1P0C628 307 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 OR9G9P0C7N8 305 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 UCP1P25874 307 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 CCR6P51684 374 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 DHODHQ02127 395 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 KIAA0141Q14154 515 aaPredicted RBP9.61□□□□□ -0.87
USP1-203ENST00000442679 H2BFWTQ7Z2G1 175 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 ZNF695Q8IW36 515 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 SGPP2Q8IWX5 399 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 ZNF491Q8N8L2 437 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 KLHL30-AS1Q8NEE0 82 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 MYOZ3Q8TDC0 251 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 TMEM230Q96A57 120 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 C7orf50Q9BRJ6 194 aaKnown RBP9.61□□□□□ -0.87
USP1-203ENST00000442679 CCDC32Q9BV29 185 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 COMMD5Q9GZQ3 224 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 TMEM222Q9H0R3 208 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 KCNIP3Q9Y2W7 256 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 NSG2Q9Y328 171 aa9.61□□□□□ -0.87
USP1-203ENST00000442679 TET2Q6N021 2002 aaPredicted RBP9.61□□□□□ -0.87
USP1-203ENST00000442679 TEX50A0A1B0GTY4 177 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 IGKV1-5P01602 117 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 TRGV3P03979 118 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 SLC6A1P30531 599 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 TPPP2P59282 170 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 OR2B8PP59922 312 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 ZNF846Q147U1 533 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 C8orf86Q6ZUL3 223 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 TMED4Q7Z7H5 227 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 SLC25A42Q86VD7 318 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 TTC9CQ8N5M4 171 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 OR4A16Q8NH70 328 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 GLYATL2Q8WU03 294 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 UBE2E2Q96LR5 201 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 TSC22D3Q99576 134 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 SLA2Q9H6Q3 261 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 COA4Q9NYJ1 87 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 PRNDQ9UKY0 176 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 OR51B2Q9Y5P1 312 aa9.6□□□□□ -0.87
USP1-203ENST00000442679 A0A1B0GW64 132 aa9.59□□□□□ -0.87
USP1-203ENST00000442679 CGB1A6NKQ9 187 aa9.59□□□□□ -0.87
USP1-203ENST00000442679 H3BUA1 57 aa9.59□□□□□ -0.87
USP1-203ENST00000442679 PLA2G10O15496 165 aa9.59□□□□□ -0.87
USP1-203ENST00000442679 CDS2O95674 445 aa9.59□□□□□ -0.87
USP1-203ENST00000442679 TRAPPC2P0DI81 140 aa9.59□□□□□ -0.87
USP1-203ENST00000442679 TRAPPC2BP0DI82 140 aa9.59□□□□□ -0.87
USP1-203ENST00000442679 AKR1C2P52895 323 aa9.59□□□□□ -0.87
USP1-203ENST00000442679 RBMS2Q15434 407 aaKnown RBP9.59□□□□□ -0.87
USP1-203ENST00000442679 SELENOHQ8IZQ5 122 aaKnown RBP9.59□□□□□ -0.87
USP1-203ENST00000442679 OR1L8Q8NGR8 309 aa9.59□□□□□ -0.87
USP1-203ENST00000442679 RRNAD1Q96FB5 475 aaKnown RBP9.59□□□□□ -0.87
USP1-203ENST00000442679 OR5B12Q96R08 314 aa9.59□□□□□ -0.87
USP1-203ENST00000442679 QTRT1Q9BXR0 403 aaKnown RBP9.59□□□□□ -0.87
USP1-203ENST00000442679 WDR12Q9GZL7 423 aaKnown RBP9.59□□□□□ -0.87
USP1-203ENST00000442679 GNB4Q9HAV0 340 aa9.59□□□□□ -0.87
USP1-203ENST00000442679 FKBP11Q9NYL4 201 aa9.59□□□□□ -0.87
USP1-203ENST00000442679 DBX1A6NMT0 343 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 C15orf61A6NNL5 157 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 RBMXL2O75526 392 aaKnown RBP9.58□□□□□ -0.88
USP1-203ENST00000442679 NDUFB6O95139 128 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 BRI3O95415 125 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 PF4P02776 101 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 ANXA3P12429 323 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 AREGP15514 252 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 SUPT4H1P63272 117 aaKnown RBP9.58□□□□□ -0.88
USP1-203ENST00000442679 TMEM187Q14656 261 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 IZUMO4Q1ZYL8 232 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 TMEM268Q5VZI3 342 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 RNASE11Q8TAA1 199 aaKnown RBP9.58□□□□□ -0.88
USP1-203ENST00000442679 LHFPL5Q8TAF8 219 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 C4orf3Q8WVX3 66 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 GALNT14Q96FL9 552 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 RAX2Q96IS3 184 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 TMEM56Q96MV1 263 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 HINT2Q9BX68 163 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 NDUFA4L2Q9NRX3 87 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 TMEM14BQ9NUH8 114 aa9.58□□□□□ -0.88
USP1-203ENST00000442679 TMEM56-RWDD3S4R434 201 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms