RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 TMEM127O75204 238 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 NDUFB8O95169 186 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 CRYGCP07315 174 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 AREGP15514 252 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 CTRB1P17538 263 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 ANKRD55Q3KP44 614 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 AADACL3Q5VUY0 350 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 ZNF57Q68EA5 555 aaPredicted RBP8.9□□□□□ -0.98
TTC28-203ENST00000442232 CTRB2Q6GPI1 263 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 THOC7Q6I9Y2 204 aaKnown RBP8.9□□□□□ -0.98
TTC28-203ENST00000442232 GPHB5Q86YW7 130 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 CROCCP3Q8IVE0 287 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 DMBX1Q8NFW5 382 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 OR5AP2Q8NGF4 316 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 OR5H6Q8NGV6 325 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 OR51H1Q8NH63 302 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 SLC25A38Q96DW6 304 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 GPHA2Q96T91 129 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 AUNIPQ9H7T9 357 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 ZC4H2Q9NQZ6 224 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 S4R3C0 116 aa8.9□□□□□ -0.98
TTC28-203ENST00000442232 DYNC2H1Q8NCM8 4307 aaKnown RBP8.89□□□□□ -0.99
TTC28-203ENST00000442232 A8MWP6 167 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 JTBO76095 146 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 FCER2P06734 321 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 CD7P09564 240 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 PTHLHP12272 177 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 CBLN1P23435 193 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 DEFB125Q8N687 156 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 TSPAN14Q8NG11 270 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 OR52B4Q8NGK2 314 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 MARC2Q969Z3 335 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 WDR89Q96FK6 387 aaPredicted RBP8.89□□□□□ -0.99
TTC28-203ENST00000442232 S100A16Q96FQ6 103 aaKnown RBP8.89□□□□□ -0.99
TTC28-203ENST00000442232 CCDC140Q96MF4 163 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 FANCD2OSQ96PS1 177 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 FAM110AQ9BQ89 295 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 SRSF8Q9BRL6 282 aaKnown RBP8.89□□□□□ -0.99
TTC28-203ENST00000442232 QTRT1Q9BXR0 403 aaKnown RBP8.89□□□□□ -0.99
TTC28-203ENST00000442232 RNF167Q9H6Y7 350 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 RETNQ9HD89 108 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 VCX3AQ9NNX9 186 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 EHFQ9NZC4 300 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 COMMD9Q9P000 198 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 CSMD3Q7Z407 3707 aa8.89□□□□□ -0.99
TTC28-203ENST00000442232 TENM2Q9NT68 2774 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 IGLV11-55A0A075B6I3 123 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 MEIS3P1A6NDR6 274 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 ZNF785A8K8V0 405 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 E7EUB6 86 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 UPK2O00526 184 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 GPR183P32249 361 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 BRWD1-AS2P59051 145 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 OR2B8PP59922 312 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 UBE2NLQ5JXB2 153 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 PLET1Q6UQ28 207 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 ADAMTSL5Q6ZMM2 481 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 ZNF818PQ6ZRF7 136 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 RBPMS2Q6ZRY4 209 aaKnown RBP8.88□□□□□ -0.99
TTC28-203ENST00000442232 GIMAP1Q8WWP7 306 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 CACNG8Q8WXS5 425 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 WFDC10AQ9H1F0 79 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 HIPK2Q9H2X6 1198 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 PLEKHA2Q9HB19 425 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 TMEM140Q9NV12 185 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 UFC1Q9Y3C8 167 aa8.88□□□□□ -0.99
TTC28-203ENST00000442232 A0A1B0GW64 132 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 TMEM213A2RRL7 107 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 MFSD2BA6NFX1 497 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 XRCC3O43542 346 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 SCAF4O95104 1147 aaKnown RBP8.87□□□□□ -0.99
TTC28-203ENST00000442232 S1PR2O95136 353 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 CLEC3BP05452 202 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 FGF2P09038 288 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 MYOD1P15172 320 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 S100GP29377 79 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 TAS2R46P59540 309 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 POU2AF1Q16633 256 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 KCTD21Q4G0X4 260 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 TMEM69Q5SWH9 247 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 BTNL8Q6UX41 500 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 HSD17B13Q7Z5P4 300 aaPredicted RBP8.87□□□□□ -0.99
TTC28-203ENST00000442232 CMTM1Q8IZ96 169 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 TMEM61Q8N0U2 210 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 UXS1Q8NBZ7 420 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 OR5H2Q8NGV7 314 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 DMRT1Q9Y5R6 373 aa8.87□□□□□ -0.99
TTC28-203ENST00000442232 TRAV25A0A0B4J276 109 aa8.86□□□□□ -0.99
TTC28-203ENST00000442232 IGLC7A0M8Q6 106 aa8.86□□□□□ -0.99
TTC28-203ENST00000442232 MARCH11A6NNE9 402 aa8.86□□□□□ -0.99
TTC28-203ENST00000442232 SNAPC5O75971 98 aa8.86□□□□□ -0.99
TTC28-203ENST00000442232 RLN1P04808 185 aa8.86□□□□□ -0.99
TTC28-203ENST00000442232 TRAPPC2P0DI81 140 aa8.86□□□□□ -0.99
TTC28-203ENST00000442232 TRAPPC2BP0DI82 140 aa8.86□□□□□ -0.99
TTC28-203ENST00000442232 EDN2P20800 178 aa8.86□□□□□ -0.99
TTC28-203ENST00000442232 KLK9Q2XQG4 91 aa8.86□□□□□ -0.99
TTC28-203ENST00000442232 LINC00322Q6ZN03 302 aaPredicted RBP8.86□□□□□ -0.99
TTC28-203ENST00000442232 SLC38A6Q8IZM9 456 aa8.86□□□□□ -0.99
TTC28-203ENST00000442232 SAMD12Q8N8I0 201 aa8.86□□□□□ -0.99
TTC28-203ENST00000442232 GDPD1Q8N9F7 314 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms