RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 SRD5A1P18405 259 aa16.77■□□□□ 0.27
VPS13B-204ENST00000441350 NKX2-1P43699 371 aaPredicted RBP16.77■□□□□ 0.27
VPS13B-204ENST00000441350 PLGLAQ15195 96 aa16.77■□□□□ 0.27
VPS13B-204ENST00000441350 PDLIM3Q53GG5 364 aaPredicted RBP16.77■□□□□ 0.27
VPS13B-204ENST00000441350 Q5BKY6 102 aa16.77■□□□□ 0.27
VPS13B-204ENST00000441350 OR52E5Q8NH55 327 aa16.77■□□□□ 0.27
VPS13B-204ENST00000441350 FKBP11Q9NYL4 201 aa16.77■□□□□ 0.27
VPS13B-204ENST00000441350 ZNF257Q9Y2Q1 563 aa16.77■□□□□ 0.27
VPS13B-204ENST00000441350 MOB4Q9Y3A3 225 aa16.77■□□□□ 0.27
VPS13B-204ENST00000441350 INAFM1C9JVW0 142 aa16.76■□□□□ 0.27
VPS13B-204ENST00000441350 G3V3Q6 166 aa16.76■□□□□ 0.27
VPS13B-204ENST00000441350 HOXA3O43365 443 aaPredicted RBP16.76■□□□□ 0.27
VPS13B-204ENST00000441350 NXPH3O95157 252 aa16.76■□□□□ 0.27
VPS13B-204ENST00000441350 MYOD1P15172 320 aa16.76■□□□□ 0.27
VPS13B-204ENST00000441350 PSMB6P28072 239 aa16.76■□□□□ 0.27
VPS13B-204ENST00000441350 SSBP2P81877 361 aaPredicted RBP16.76■□□□□ 0.27
VPS13B-204ENST00000441350 TNFRSF9Q07011 255 aa16.76■□□□□ 0.27
VPS13B-204ENST00000441350 RAB32Q13637 225 aa16.76■□□□□ 0.27
VPS13B-204ENST00000441350 C16orf82Q7Z2V1 217 aa16.76■□□□□ 0.27
VPS13B-204ENST00000441350 C5orf56Q8N8D9 126 aa16.76■□□□□ 0.27
VPS13B-204ENST00000441350 CACFD1Q9UGQ2 172 aa16.76■□□□□ 0.27
VPS13B-204ENST00000441350 VPREB3Q9UKI3 123 aa16.76■□□□□ 0.27
VPS13B-204ENST00000441350 OR51B2Q9Y5P1 312 aa16.76■□□□□ 0.27
VPS13B-204ENST00000441350 BTBD17A6NE02 478 aa16.75■□□□□ 0.27
VPS13B-204ENST00000441350 FGF16O43320 207 aa16.75■□□□□ 0.27
VPS13B-204ENST00000441350 MPC2O95563 127 aa16.75■□□□□ 0.27
VPS13B-204ENST00000441350 SCGB1D2O95969 90 aa16.75■□□□□ 0.27
VPS13B-204ENST00000441350 AMY1AP04745 511 aa16.75■□□□□ 0.27
VPS13B-204ENST00000441350 MAS1LP35410 378 aa16.75■□□□□ 0.27
VPS13B-204ENST00000441350 HSPE1P61604 102 aaKnown RBP16.75■□□□□ 0.27
VPS13B-204ENST00000441350 CLCC1Q96S66 551 aa16.75■□□□□ 0.27
VPS13B-204ENST00000441350 POMT1Q9Y6A1 747 aa16.75■□□□□ 0.27
VPS13B-204ENST00000441350 TEX50A0A1B0GTY4 177 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 SMLR1H3BR10 107 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 K7EPK0 472 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 CHST1O43916 411 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 SPCS3P61009 180 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 LRRC37A5PQ49AS3 106 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 TMEM86BQ8N661 226 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 OR5B3Q8NH48 314 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 COMMD5Q9GZQ3 224 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 ZFP57Q9NU63 452 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 TRAV14DV4A0A0A6YYC5 116 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 CA2P00918 260 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 HLA-DRB1P01911 266 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 COMPP49747 757 aaPredicted RBP16.74■□□□□ 0.27
VPS13B-204ENST00000441350 POLR2GP62487 172 aaKnown RBP eCLIP16.74■□□□□ 0.27
VPS13B-204ENST00000441350 RASL11BQ9BPW5 248 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 MAGT1Q9H0U3 335 aa16.74■□□□□ 0.27
VPS13B-204ENST00000441350 RCL1Q9Y2P8 373 aaKnown RBP16.74■□□□□ 0.27
VPS13B-204ENST00000441350 E7EUB6 86 aa16.73■□□□□ 0.27
VPS13B-204ENST00000441350 H0YIZ8 118 aa16.73■□□□□ 0.27
VPS13B-204ENST00000441350 M0QZK8 103 aa16.73■□□□□ 0.27
VPS13B-204ENST00000441350 IFNA17P01571 189 aa16.73■□□□□ 0.27
VPS13B-204ENST00000441350 S100A10P60903 97 aa16.73■□□□□ 0.27
VPS13B-204ENST00000441350 FGL1Q08830 312 aa16.73■□□□□ 0.27
VPS13B-204ENST00000441350 TNXAQ16473 311 aa16.73■□□□□ 0.27
VPS13B-204ENST00000441350 RBMS3Q6XE24 437 aaKnown RBP16.73■□□□□ 0.27
VPS13B-204ENST00000441350 OR1L8Q8NGR8 309 aa16.73■□□□□ 0.27
VPS13B-204ENST00000441350 RNF126Q9BV68 326 aa16.73■□□□□ 0.27
VPS13B-204ENST00000441350 RBKSQ9H477 322 aa16.73■□□□□ 0.27
VPS13B-204ENST00000441350 NDUFA4L2Q9NRX3 87 aa16.73■□□□□ 0.27
VPS13B-204ENST00000441350 LSM5Q9Y4Y9 91 aaKnown RBP16.73■□□□□ 0.27
VPS13B-204ENST00000441350 MAST4O15021 2626 aa16.73■□□□□ 0.27
VPS13B-204ENST00000441350 SYNGR2O43760 224 aa16.72■□□□□ 0.27
VPS13B-204ENST00000441350 ACTL6BO94805 426 aa16.72■□□□□ 0.27
VPS13B-204ENST00000441350 OPN1MWP04001 364 aa16.72■□□□□ 0.27
VPS13B-204ENST00000441350 OPN1MW2P0DN77 364 aa16.72■□□□□ 0.27
VPS13B-204ENST00000441350 OPN1MW3P0DN78 364 aa16.72■□□□□ 0.27
VPS13B-204ENST00000441350 C10orf55Q5SWW7 151 aa16.72■□□□□ 0.27
VPS13B-204ENST00000441350 ZNF562Q6V9R5 426 aa16.72■□□□□ 0.27
VPS13B-204ENST00000441350 C11orf1Q9H5F2 150 aa16.72■□□□□ 0.27
VPS13B-204ENST00000441350 TNFRSF19Q9NS68 423 aa16.72■□□□□ 0.27
VPS13B-204ENST00000441350 A0A1B0GW64 132 aa16.71■□□□□ 0.27
VPS13B-204ENST00000441350 CGB1A6NKQ9 187 aa16.71■□□□□ 0.27
VPS13B-204ENST00000441350 MED6O75586 246 aa16.71■□□□□ 0.27
VPS13B-204ENST00000441350 DEDDO75618 318 aa16.71■□□□□ 0.27
VPS13B-204ENST00000441350 PRCDQ00LT1 54 aa16.71■□□□□ 0.27
VPS13B-204ENST00000441350 FN1P02751 2386 aaKnown RBP16.71■□□□□ 0.27
VPS13B-204ENST00000441350 LYL1P12980 280 aa16.7■□□□□ 0.26
VPS13B-204ENST00000441350 GNB1P62873 340 aa16.7■□□□□ 0.26
VPS13B-204ENST00000441350 CX3CL1P78423 397 aa16.7■□□□□ 0.26
VPS13B-204ENST00000441350 SPINK9Q5DT21 86 aa16.7■□□□□ 0.26
VPS13B-204ENST00000441350 PRSS54Q6PEW0 395 aa16.7■□□□□ 0.26
VPS13B-204ENST00000441350 OR5AC2Q9NZP5 309 aa16.7■□□□□ 0.26
VPS13B-204ENST00000441350 IGHV7-81A0A0B4J1V7 117 aa16.7■□□□□ 0.26
VPS13B-204ENST00000441350 WRBO00258 174 aa16.7■□□□□ 0.26
VPS13B-204ENST00000441350 SSSCA1O60232 199 aa16.7■□□□□ 0.26
VPS13B-204ENST00000441350 C1QBP02746 253 aa16.7■□□□□ 0.26
VPS13B-204ENST00000441350 PET100P0DJ07 73 aa16.7■□□□□ 0.26
VPS13B-204ENST00000441350 RPL27AP46776 148 aaKnown RBP16.7■□□□□ 0.26
VPS13B-204ENST00000441350 FXYD3Q14802 87 aa16.7■□□□□ 0.26
VPS13B-204ENST00000441350 C11orf87Q6NUJ2 197 aa16.7■□□□□ 0.26
VPS13B-204ENST00000441350 SRSF12Q8WXF0 261 aaKnown RBP16.7■□□□□ 0.26
VPS13B-204ENST00000441350 HSPB9Q9BQS6 159 aa16.7■□□□□ 0.26
VPS13B-204ENST00000441350 DNAJC9-AS1A6NH13 148 aa16.69■□□□□ 0.26
VPS13B-204ENST00000441350 CEBPZOSA8MTT3 80 aa16.69■□□□□ 0.26
VPS13B-204ENST00000441350 CRLF1O75462 422 aa16.69■□□□□ 0.26
VPS13B-204ENST00000441350 CNIH1O95406 144 aa16.69■□□□□ 0.26
VPS13B-204ENST00000441350 TMEM50AO95807 157 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms