RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 NPY1RP25929 384 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 S100A7P31151 101 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 LEMD1Q68G75 181 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 OR13A1Q8NGR1 328 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 OR5B3Q8NH48 314 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 DNASE2BQ8WZ79 361 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 FAM173AQ9BQD7 235 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 PCED1AQ9H1Q7 454 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 NPVFQ9HCQ7 196 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 LOC102723996A0A087X1L8 192 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 RELQ04864 619 aaPredicted RBP7.56□□□□□ -1.2
COPB1-202ENST00000439561 IBA57Q5T440 356 aaKnown RBP7.56□□□□□ -1.2
COPB1-202ENST00000439561 WDR73Q6P4I2 378 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 TREML4Q6UXN2 200 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 COLCA1Q6ZS62 124 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 MIR17HGQ75NE6 70 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 ZBTB34Q8NCN2 500 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 OR2M7Q8NG81 312 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 ZNF596Q8TC21 504 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 C20orf144Q9BQM9 153 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 STRADBQ9C0K7 418 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 SELENOKQ9Y6D0 94 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 HEATR1Q9H583 2144 aaKnown RBP7.55□□□□□ -1.2
COPB1-202ENST00000439561 IGHV3OR15-7A0A075B7D8 119 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 TRAV3A0A0B4J244 114 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 IGHV3-48P01763 117 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 LINC00614P0C842 121 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 IGFBP2P18065 325 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 GPR6P46095 362 aaPredicted RBP7.55□□□□□ -1.2
COPB1-202ENST00000439561 STPG4Q8N801 248 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 ZNF738Q8NE65 137 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 EAF1Q96JC9 268 aaPredicted RBP7.55□□□□□ -1.2
COPB1-202ENST00000439561 TECRQ9NZ01 308 aaKnown RBP7.55□□□□□ -1.2
COPB1-202ENST00000439561 ZFP30Q9Y2G7 519 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 HSBP1L1C9JCN9 74 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 MLNRO43193 412 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 TOX4O94842 621 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 DUSP3P51452 185 aaPredicted RBP7.55□□□□□ -1.2
COPB1-202ENST00000439561 RELBQ01201 579 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 MAJINQ3KP22 176 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 PPP1R32Q7Z5V6 425 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 LYG1Q8N1E2 194 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 OR2D3Q8NGH3 330 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 CT55Q8WUE5 264 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 LRRC29Q8WV35 223 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 MGST2Q99735 147 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 GGTLC1Q9BX51 225 aa7.55□□□□□ -1.2
COPB1-202ENST00000439561 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.54□□□□□ -1.2
COPB1-202ENST00000439561 GPX1P07203 203 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 C6orf15Q6UXA7 325 aaPredicted RBP7.54□□□□□ -1.2
COPB1-202ENST00000439561 OR2Z1Q8NG97 314 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 SAP25Q8TEE9 199 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 RCHY1Q96PM5 261 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 TMEM140Q9NV12 185 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 IL19Q9UHD0 177 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 METRNQ9UJH8 293 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 TCF19Q9Y242 345 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 WASHC3Q9Y3C0 194 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 SIT1Q9Y3P8 196 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 PLAUP00749 431 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 APOA2P02652 100 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 STAG3L2P0CL84 134 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 STAG3L3P0CL85 134 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 LHX2P50458 406 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 TCTAP57738 103 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 UBE2L3P68036 154 aaKnown RBP7.54□□□□□ -1.2
COPB1-202ENST00000439561 EFNB3Q15768 340 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 SMIM21Q3B7S5 101 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 SP5Q6BEB4 398 aaPredicted RBP7.54□□□□□ -1.2
COPB1-202ENST00000439561 C1orf174Q8IYL3 243 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 TMEM251Q8N6I4 163 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 SSBP4Q9BWG4 385 aaPredicted RBP7.54□□□□□ -1.2
COPB1-202ENST00000439561 PPP1R14DQ9NXH3 145 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 SLC45A2Q9UMX9 530 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 LNP1A1A4G5 178 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 TMPRSS2O15393 492 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 MPDU1O75352 247 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 WNT2P09544 360 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 C3orf79P0CE67 100 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 MYOD1P15172 320 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 OPRK1P41145 380 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 Q0VFX4 171 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 TEX43Q6ZNM6 134 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 TMEM144Q7Z5S9 345 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 WDR86Q86TI4 376 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 Q8NFD4 153 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 C22orf15Q8WYQ4 148 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 KCNS1Q96KK3 526 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 TRIB1Q96RU8 372 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 TTTY12Q9BZ98 90 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 ASCL3Q9NQ33 180 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 ZNF355PQ9NSJ1 428 aa7.54□□□□□ -1.2
COPB1-202ENST00000439561 TRBV6-6A0A0A6YYG2 114 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 ZNF324O75467 553 aaPredicted RBP7.53□□□□□ -1.2
COPB1-202ENST00000439561 FOXA3P55318 350 aaPredicted RBP7.53□□□□□ -1.2
COPB1-202ENST00000439561 FOXF2Q12947 444 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 RNPS1Q15287 305 aaKnown RBP7.53□□□□□ -1.2
COPB1-202ENST00000439561 PPP1R35Q8TAP8 253 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 PARD6GQ9BYG4 376 aaPredicted RBP7.53□□□□□ -1.2
COPB1-202ENST00000439561 POLEQ07864 2286 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms