RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 RPL24P83731 157 aaKnown RBP5.44□□□□□ -1.54
BDNF-211ENST00000439476 LRRC75BQ2VPJ9 315 aa5.44□□□□□ -1.54
BDNF-211ENST00000439476 C1QL4Q86Z23 238 aa5.44□□□□□ -1.54
BDNF-211ENST00000439476 TAF15Q92804 592 aaKnown RBP eCLIP5.44□□□□□ -1.54
BDNF-211ENST00000439476 GPHA2Q96T91 129 aa5.44□□□□□ -1.54
BDNF-211ENST00000439476 DERL1Q9BUN8 251 aa5.44□□□□□ -1.54
BDNF-211ENST00000439476 RTN4RQ9BZR6 473 aa5.44□□□□□ -1.54
BDNF-211ENST00000439476 FBLN5Q9UBX5 448 aa5.44□□□□□ -1.54
BDNF-211ENST00000439476 RALYQ9UKM9 306 aaKnown RBP5.44□□□□□ -1.54
BDNF-211ENST00000439476 WIPI2Q9Y4P8 454 aa5.44□□□□□ -1.54
BDNF-211ENST00000439476 IGHV2-70DA0A0C4DH43 119 aa5.44□□□□□ -1.54
BDNF-211ENST00000439476 DEFB108AA8MXU0 73 aa5.44□□□□□ -1.54
BDNF-211ENST00000439476 RBFOX2O43251 390 aaKnown RBP eCLIP5.44□□□□□ -1.54
BDNF-211ENST00000439476 LYZL6O75951 148 aa5.44□□□□□ -1.54
BDNF-211ENST00000439476 SPINK2P20155 84 aa5.44□□□□□ -1.54
BDNF-211ENST00000439476 C16orf82Q7Z2V1 217 aa5.44□□□□□ -1.54
BDNF-211ENST00000439476 PLA2G3Q9NZ20 509 aa5.44□□□□□ -1.54
BDNF-211ENST00000439476 TCF20Q9UGU0 1960 aaKnown RBP5.44□□□□□ -1.54
BDNF-211ENST00000439476 COX6CP09669 75 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 PSG2P11465 335 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 IER3P46695 156 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 TWIST1Q15672 202 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 CXorf67Q86X51 503 aaPredicted RBP5.43□□□□□ -1.54
BDNF-211ENST00000439476 C1orf210Q8IVY1 113 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 OR1P1Q8NH06 330 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 CCL17Q92583 94 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 ABHD14AQ9BUJ0 271 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 SMPXQ9UHP9 88 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 JPT1Q9UK76 154 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 OR51B2Q9Y5P1 312 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 HEATR5AQ86XA9 2040 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 GAGE12BA1L429 117 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 DLL1O00548 723 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 RAMP1O60894 148 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 PTGDSP41222 190 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 KIR2DL2P43627 348 aaPredicted RBP5.43□□□□□ -1.54
BDNF-211ENST00000439476 ZXDAP98168 799 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 C5orf47Q569G3 176 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.43□□□□□ -1.54
BDNF-211ENST00000439476 RND1Q92730 232 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 ZNF501Q96CX3 271 aaPredicted RBP5.43□□□□□ -1.54
BDNF-211ENST00000439476 WASHC3Q9Y3C0 194 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 SELENOKQ9Y6D0 94 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 PXMP4Q9Y6I8 212 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 TRAV39A0A0B4J263 110 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 A0A1W2PS18 150 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 SRP19P09132 144 aaKnown RBP5.43□□□□□ -1.54
BDNF-211ENST00000439476 SCGB1A1P11684 91 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 PRDX2P32119 198 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 SUPT4H1P63272 117 aaKnown RBP5.43□□□□□ -1.54
BDNF-211ENST00000439476 RELBQ01201 579 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 C10orf128Q5T292 105 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 WDR25Q64LD2 544 aaPredicted RBP5.43□□□□□ -1.54
BDNF-211ENST00000439476 ZNF788Q6ZQV5 615 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 WDR31Q8NA23 367 aa5.43□□□□□ -1.54
BDNF-211ENST00000439476 A0A0A6YYD4 124 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 TRAV25A0A0B4J276 109 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 F2RL2O00254 374 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 KLK10O43240 276 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 NPIPB7O75200 414 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 SCTP09683 121 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 CCL3P10147 92 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 RPL27AP46776 148 aaKnown RBP5.42□□□□□ -1.54
BDNF-211ENST00000439476 PSMB2P49721 201 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 MFAP2P55001 183 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 HEPN1Q6WQI6 88 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 CDX2Q99626 313 aaPredicted RBP5.42□□□□□ -1.54
BDNF-211ENST00000439476 SOX21Q9Y651 276 aaPredicted RBP5.42□□□□□ -1.54
BDNF-211ENST00000439476 ANAPC1Q9H1A4 1944 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 PPIAL4EA0A075B759 164 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 IGHV3-43A0A0B4J1X8 118 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 IGHV5-10-1A0A0J9YXX1 117 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 ODAMA1E959 279 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 B5MCH6 92 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 PPIAL4DF5H284 164 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 C16orf97H3BN30 126 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 PPIAL4FP0DN26 164 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 IGHV3-43DP0DP04 118 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 SRSF9Q13242 221 aaKnown RBP eCLIP5.42□□□□□ -1.54
BDNF-211ENST00000439476 CSRP2Q16527 193 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 RSPO4Q2I0M5 234 aaPredicted RBP5.42□□□□□ -1.54
BDNF-211ENST00000439476 ZNF506Q5JVG8 444 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 PAPPA-AS1Q5QFB9 102 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 DHRS13Q6UX07 377 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 RBPMS2Q6ZRY4 209 aaKnown RBP5.42□□□□□ -1.54
BDNF-211ENST00000439476 MOGAT3Q86VF5 341 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 DEFB123Q8N688 67 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 VWCEQ96DN2 955 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 SRSF8Q9BRL6 282 aaKnown RBP5.42□□□□□ -1.54
BDNF-211ENST00000439476 TM2D1Q9BX74 207 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 LINC00470Q9BZP3 86 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 AURKAIP1Q9NWT8 199 aaPredicted RBP5.42□□□□□ -1.54
BDNF-211ENST00000439476 CACNA1DQ01668 2161 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 A0A087WWC5 75 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 TMPRSS2O15393 492 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 KBTBD11O94819 623 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 ESDP10768 282 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 MPV17P39210 176 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 HSPE1P61604 102 aaKnown RBP5.42□□□□□ -1.54
BDNF-211ENST00000439476 TRIP6Q15654 476 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms