RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 FBXL19-AS1Q494R0 122 aa11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 LINC01560Q8TB33 94 aa11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 RNASE6Q93091 150 aaKnown RBP11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 R3HDM4Q96D70 268 aa11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 NDUFAF3Q9BU61 184 aa11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 SRD5A3Q9H8P0 318 aa11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 A0A1W2PPQ1 181 aa11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 SHISA9B4DS77 424 aa11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 M0R1X1 148 aa11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 DEFA4P12838 97 aa11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 DUTP33316 252 aaKnown RBP11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 SERF2P84101 59 aa11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 TMEM41BQ5BJD5 291 aa11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 TRAT1Q6PIZ9 186 aa11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 OR5T1Q8NG75 326 aa11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 QTRT1Q9BXR0 403 aaKnown RBP11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 FUT9Q9Y231 359 aa11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 ANKHD1Q8IWZ3 2542 aaKnown RBP11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 YLPM1P49750 1951 aaKnown RBP11.45□□□□□ -0.58
PTCHD3-201ENST00000438700 MAP1LC3B2A6NCE7 125 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 RAB29O14966 203 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 LHBP01229 141 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 OR9G9P0C7N8 305 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 NUTF2P61970 127 aaKnown RBP11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 FAM90A1Q86YD7 464 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 ZCCHC24Q8N2G6 241 aaKnown RBP11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 RPP25LQ8N5L8 163 aaKnown RBP11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 DEFB108BQ8NET1 73 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 OR10P1Q8NGE3 313 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 OR51G1Q8NGK1 321 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 NEUROG1Q92886 237 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 MAP1LC3BQ9GZQ8 125 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 HIPK2Q9H2X6 1198 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 DYSFO75923 2080 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 LOXL3P58215 753 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 CCL8P80075 99 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 PAX5Q02548 391 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 TFF3Q07654 80 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 PMS2P11Q13670 270 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 ACSM6Q6P461 480 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 PPP1R35Q8TAP8 253 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 MBD3L1Q8WWY6 194 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 SNHG12Q9BXW3 62 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 ACTR3CQ9C0K3 210 aaPredicted RBP11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 SLC25A22Q9H936 323 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 CBLN4Q9NTU7 201 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 VAX2Q9UIW0 290 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 JPT1Q9UK76 154 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 DSCAML1Q8TD84 2053 aa11.44□□□□□ -0.58
PTCHD3-201ENST00000438700 TMEM8BA6NDV4 472 aa11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 PMS2P5A8MQ11 134 aa11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 RPL23P62829 140 aaKnown RBP11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 TEX38Q6PEX7 206 aa11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 TGIF2LYQ8IUE0 185 aa11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 RNASEH2CQ8TDP1 164 aaKnown RBP11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 AURKAIP1Q9NWT8 199 aaPredicted RBP11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 RNF7Q9UBF6 113 aa11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 C17orf100A8MU93 164 aa11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 E7EQL1 145 aa11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 GALR1P47211 349 aa11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 Q8TCH9 128 aa11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 RAB24Q969Q5 203 aa11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 TMEM147Q9BVK8 224 aa11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 CALYQ9NYX4 217 aa11.43□□□□□ -0.58
PTCHD3-201ENST00000438700 RAI1Q7Z5J4 1906 aaPredicted RBP11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 TET2Q6N021 2002 aaPredicted RBP11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 CD3EP07766 207 aa11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 CD33P20138 364 aa11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 BSXQ3C1V8 233 aa11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 PRAMEF5Q5TYX0 476 aa11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 C1orf229Q6ZS94 237 aaPredicted RBP11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 TCTEX1D1Q8N7M0 179 aa11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 LHX4Q969G2 390 aa11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 PINX1Q96BK5 328 aaKnown RBP11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 IFI27L2Q9H2X8 130 aa11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 SLC39A9Q9NUM3 307 aa11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 DCAF16Q9NXF7 216 aa11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 HIVEP3Q5T1R4 2406 aa11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 PPP5D1E7EU14 171 aa11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 ACACBO00763 2458 aa11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 TMEM241Q24JQ0 296 aa11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 CIB3Q96Q77 187 aaPredicted RBP11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 PARD6GQ9BYG4 376 aaPredicted RBP11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 TANC2Q9HCD6 1990 aa11.42□□□□□ -0.58
PTCHD3-201ENST00000438700 VSTM5A8MXK1 200 aa11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 YPEL1O60688 119 aa11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 BTF3P20290 206 aaKnown RBP11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 FAM3BP58499 235 aaPredicted RBP11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 NOL4LQ96MY1 436 aaPredicted RBP11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 YPEL2Q96QA6 119 aa11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 DIRC2Q96SL1 478 aa11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 PYGO2Q9BRQ0 406 aa11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 CTDSP1Q9GZU7 261 aa11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 NAT8Q9UHE5 227 aa11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 TRAV3A0A0B4J244 114 aa11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 H7BYZ3 331 aa11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 NUPR1O60356 82 aa11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 PLAUP00749 431 aa11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 FFAR4Q5NUL3 377 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms