RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 ERG28Q9UKR5 140 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 ABCA3Q99758 1704 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 UCNP55089 124 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 LRRC61Q9BV99 259 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 SERF1AO75920 110 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 NDUFA3O95167 84 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 TNFRSF6BO95407 300 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 NGFRP08138 427 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 LEPP41159 167 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 STARD6P59095 220 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 CXorf66Q5JRM2 361 aaPredicted RBP9.91□□□□□ -0.82
PTCH1-209ENST00000437951 TMEM171Q8WVE6 324 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 JPT1Q9UK76 154 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 GBF1Q92538 1859 aa9.91□□□□□ -0.82
PTCH1-209ENST00000437951 IGKCP01834 107 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 PTGDSP41222 190 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 MORN3Q6PF18 240 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-209ENST00000437951 PATE1Q8WXA2 126 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 DNAJC30Q96LL9 226 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 TRAV5A0A0B4J249 113 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 SHISA8B8ZZ34 492 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 M0R2P5 195 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 ZNF71Q9NQZ8 489 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-209ENST00000437951 SPEM2Q0P670 501 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 C1QL3Q5VWW1 255 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 EEF1AKMT3Q96AZ1 226 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 PRRT4C9JH25 899 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 CEACAM4O75871 244 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 TRIP6Q15654 476 aaKnown RBP9.9□□□□□ -0.82
PTCH1-209ENST00000437951 GDF15Q99988 308 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 COL11A1P12107 1806 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-209ENST00000437951 A0A0G2JMM0 328 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 A0A1W2PPB8 328 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 KIR3DP1A8MWS1 328 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 CCL7P80098 99 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 CFAP161Q6P656 301 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 C1orf210Q8IVY1 113 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 DRAM1Q8N682 238 aa9.9□□□□□ -0.82
PTCH1-209ENST00000437951 CCL2P13500 99 aa9.9□□□□□ -0.83
PTCH1-209ENST00000437951 KLHDC2Q9Y2U9 406 aa9.9□□□□□ -0.83
PTCH1-209ENST00000437951 LINC01465Q8N7H1 131 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 DEFB124Q8NES8 71 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 C18orf15Q96N68 181 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 SF3B6Q9Y3B4 125 aaKnown RBP9.89□□□□□ -0.83
PTCH1-209ENST00000437951 NPIPB4C9JG80 1138 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 IGHV3-13P01766 116 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 IGHV3-7P01780 117 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 UNQ9370/PRO34162Q6UXP9 181 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 HIST1H2BKO60814 126 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 HIST1H2BJP06899 126 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 HIST1H2BOP23527 126 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 HIST1H2BBP33778 126 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 IFI27P40305 119 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-209ENST00000437951 HIST1H2BDP58876 126 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 HIST1H2BCP62807 126 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 HIST2H2BEQ16778 126 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-209ENST00000437951 LINC00305Q7Z4B0 112 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 HIST1H2BHQ93079 126 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 HIST1H2BNQ99877 126 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 HIST1H2BMQ99879 126 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 DYSFO75923 2080 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 EDIL3O43854 480 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 C1QTNF9P0C862 333 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 NANOS3P60323 173 aaKnown RBP9.89□□□□□ -0.83
PTCH1-209ENST00000437951 WNT2BQ93097 391 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 TMEM86BQ8N661 226 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 OR52E5Q8NH55 327 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 DPH3P1Q9H4G8 78 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 OSTCQ9NRP0 149 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 RND2P52198 227 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 ATP5G2Q06055 141 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 RSPO2Q6UXX9 243 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-209ENST00000437951 HEPN1Q6WQI6 88 aa9.89□□□□□ -0.83
PTCH1-209ENST00000437951 ZNF48Q96MX3 618 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-209ENST00000437951 NCKAP5O14513 1909 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 SPINK8P0C7L1 97 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 WFDC3Q8IUB2 231 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 PPIAL4EA0A075B759 164 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 IGHV1-69-2A0A0G2JMI3 117 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 PPIAL4FP0DN26 164 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 PF4V1P10720 104 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 ZNF708P17019 499 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 TMEM155Q4W5P6 130 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.88□□□□□ -0.83
PTCH1-209ENST00000437951 COQ2Q96H96 371 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 PPIAL4AQ9Y536 164 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 HIGD1CA8MV81 97 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 FAM57AQ8TBR7 257 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 TMEM186Q96B77 213 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 IDI2-AS1Q9NZ38 188 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 NAPSAO96009 420 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 DCAF10Q5QP82 559 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 FBXW9Q5XUX1 488 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 CCL4L1Q8NHW4 92 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 HIST1H2BLQ99880 126 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 TMEM74BQ9NUR3 256 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 HS3ST3B1Q9Y662 390 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 TRAV8-1A0A0A6YYK1 113 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 A0A1B0GW64 132 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms