RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 BVESQ8NE79 360 aa10.8□□□□□ -0.68
LINC01088-201ENST00000437737 RTBDNQ9BSG5 229 aaPredicted RBP10.8□□□□□ -0.68
LINC01088-201ENST00000437737 ABHD14AQ9BUJ0 271 aa10.8□□□□□ -0.68
LINC01088-201ENST00000437737 C5orf66Q9H5L9 145 aa10.8□□□□□ -0.68
LINC01088-201ENST00000437737 TUBA4BQ9H853 241 aa10.8□□□□□ -0.68
LINC01088-201ENST00000437737 RETNQ9HD89 108 aa10.8□□□□□ -0.68
LINC01088-201ENST00000437737 FLVCR2Q9UPI3 526 aa10.8□□□□□ -0.68
LINC01088-201ENST00000437737 TEX13DA0A0J9YY54 714 aaPredicted RBP10.79□□□□□ -0.68
LINC01088-201ENST00000437737 A0A1W2PN81 502 aa10.79□□□□□ -0.68
LINC01088-201ENST00000437737 IGLV1-51P01701 117 aa10.79□□□□□ -0.68
LINC01088-201ENST00000437737 OR4E1P0C645 316 aa10.79□□□□□ -0.68
LINC01088-201ENST00000437737 AKR1C4P17516 323 aa10.79□□□□□ -0.68
LINC01088-201ENST00000437737 ANXA7P20073 488 aaKnown RBP10.79□□□□□ -0.68
LINC01088-201ENST00000437737 CHRNA7P36544 502 aa10.79□□□□□ -0.68
LINC01088-201ENST00000437737 PIGPP57054 158 aa10.79□□□□□ -0.68
LINC01088-201ENST00000437737 GLDNQ6ZMI3 551 aaPredicted RBP10.79□□□□□ -0.68
LINC01088-201ENST00000437737 CASTOR1Q8WTX7 329 aa10.79□□□□□ -0.68
LINC01088-201ENST00000437737 FLYWCH2Q96CP2 140 aaKnown RBP10.79□□□□□ -0.68
LINC01088-201ENST00000437737 AGMATQ9BSE5 352 aa10.79□□□□□ -0.68
LINC01088-201ENST00000437737 OR2D2Q9H210 308 aa10.79□□□□□ -0.68
LINC01088-201ENST00000437737 CCL28Q9NRJ3 127 aa10.79□□□□□ -0.68
LINC01088-201ENST00000437737 SLC2A9Q9NRM0 540 aa10.79□□□□□ -0.68
LINC01088-201ENST00000437737 KIAA1456Q9P272 454 aa10.79□□□□□ -0.68
LINC01088-201ENST00000437737 IGHV7-81A0A0B4J1V7 117 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 IGKV1D-13A0A0B4J2D9 117 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 SLC31A2O15432 143 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 CREBL2O60519 120 aaPredicted RBP10.78□□□□□ -0.68
LINC01088-201ENST00000437737 IGHV3-11P01762 117 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 HLA-DRB1P01911 266 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 IGKV1-13P0DP09 117 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 DHODHQ02127 395 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 CT45A1Q5HYN5 189 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 ZNF66Q6ZN08 573 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 ZNF818PQ6ZRF7 136 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 TCTEX1D1Q8N7M0 179 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 ZNF439Q8NDP4 499 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 CT45A3Q8NHU0 189 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 LINC00476Q8WZB0 136 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 DDB2Q92466 427 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 HSD17B10Q99714 261 aaKnown RBP10.78□□□□□ -0.68
LINC01088-201ENST00000437737 FAM110AQ9BQ89 295 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 TPSG1Q9NRR2 321 aa10.78□□□□□ -0.68
LINC01088-201ENST00000437737 C7orf66A4D0T2 115 aa10.77□□□□□ -0.69
LINC01088-201ENST00000437737 CRYM-AS1A6NIL9 109 aa10.77□□□□□ -0.69
LINC01088-201ENST00000437737 MPPED1O15442 326 aa10.77□□□□□ -0.69
LINC01088-201ENST00000437737 ST8SIA5O15466 376 aa10.77□□□□□ -0.69
LINC01088-201ENST00000437737 LY6G6CO95867 125 aa10.77□□□□□ -0.69
LINC01088-201ENST00000437737 HSPB1P04792 205 aaKnown RBP10.77□□□□□ -0.69
LINC01088-201ENST00000437737 SRPXP78539 464 aa10.77□□□□□ -0.69
LINC01088-201ENST00000437737 CATR1Q13166 79 aa10.77□□□□□ -0.69
LINC01088-201ENST00000437737 FAM71F2Q6NXP2 309 aa10.77□□□□□ -0.69
LINC01088-201ENST00000437737 LYG2Q86SG7 212 aa10.77□□□□□ -0.69
LINC01088-201ENST00000437737 ADAD2Q8NCV1 583 aaKnown RBP10.77□□□□□ -0.69
LINC01088-201ENST00000437737 ZNF431Q8TF32 576 aaPredicted RBP10.77□□□□□ -0.69
LINC01088-201ENST00000437737 GALNT14Q96FL9 552 aa10.77□□□□□ -0.69
LINC01088-201ENST00000437737 ADTRPQ96IZ2 230 aa10.77□□□□□ -0.69
LINC01088-201ENST00000437737 ZNF251Q9BRH9 671 aa10.77□□□□□ -0.69
LINC01088-201ENST00000437737 RNF150Q9ULK6 438 aa10.77□□□□□ -0.69
LINC01088-201ENST00000437737 FRAS1Q86XX4 4008 aa10.77□□□□□ -0.69
LINC01088-201ENST00000437737 C9orf170A2RU37 121 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 NBR2O15453 112 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 PGLYRP1O75594 196 aaPredicted RBP10.76□□□□□ -0.69
LINC01088-201ENST00000437737 SFT2D2O95562 160 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 HLA-AP01891 365 aaKnown RBP10.76□□□□□ -0.69
LINC01088-201ENST00000437737 PI3P19957 117 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 VAMP1P23763 118 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 CNTFRP26992 372 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 ZNF134P52741 427 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 TAGLNQ01995 201 aaKnown RBP10.76□□□□□ -0.69
LINC01088-201ENST00000437737 PHLDA2Q53GA4 152 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 LIN54Q6MZP7 749 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 GTSCR1Q86UQ5 136 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 COQ8AQ8NI60 647 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 CD300LFQ8TDQ1 290 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 PHB2Q99623 299 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 PARP12Q9H0J9 701 aaKnown RBP10.76□□□□□ -0.69
LINC01088-201ENST00000437737 IFI27L2Q9H2X8 130 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 NAA60Q9H7X0 242 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 FAM212BQ9NTI7 297 aaPredicted RBP10.76□□□□□ -0.69
LINC01088-201ENST00000437737 SDHAF2Q9NX18 166 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 FOXA2Q9Y261 457 aaPredicted RBP10.76□□□□□ -0.69
LINC01088-201ENST00000437737 PRELID3BQ9Y3B1 194 aa10.76□□□□□ -0.69
LINC01088-201ENST00000437737 A0A0B4J2A0 478 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 C3orf85A0A1B0GTC6 90 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 H0Y980 276 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 SOX15O60248 233 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 F2RP25116 425 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 ZNF137PP52743 207 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 CBX3Q13185 183 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 DHRS2Q13268 280 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 PPP1R1AQ13522 171 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 TBC1D26Q86UD7 250 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 ABHD5Q8WTS1 349 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 TMEM230Q96A57 120 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 ABHD14BQ96IU4 210 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 SHPKQ9UHJ6 478 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 ALG5Q9Y673 324 aa10.75□□□□□ -0.69
LINC01088-201ENST00000437737 SSNA1O43805 119 aa10.74□□□□□ -0.69
LINC01088-201ENST00000437737 ATG12O94817 140 aa10.74□□□□□ -0.69
LINC01088-201ENST00000437737 IGLV2-14P01704 120 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms