RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 H1FXQ92522 213 aaKnown RBP13.67□□□□□ -0.22
LIMK1-203ENST00000435201 SDF2L1Q9HCN8 221 aa13.67□□□□□ -0.22
LIMK1-203ENST00000435201 NPVFQ9HCQ7 196 aa13.67□□□□□ -0.22
LIMK1-203ENST00000435201 FKBP11Q9NYL4 201 aa13.67□□□□□ -0.22
LIMK1-203ENST00000435201 BET1LQ9NYM9 111 aa13.67□□□□□ -0.22
LIMK1-203ENST00000435201 PTPRQQ9UMZ3 2332 aa13.67□□□□□ -0.22
LIMK1-203ENST00000435201 ZNF727A8MUV8 499 aa13.67□□□□□ -0.22
LIMK1-203ENST00000435201 FCN3O75636 299 aa13.67□□□□□ -0.22
LIMK1-203ENST00000435201 FBXL19-AS1Q494R0 122 aa13.67□□□□□ -0.22
LIMK1-203ENST00000435201 NEUROG1Q92886 237 aa13.67□□□□□ -0.22
LIMK1-203ENST00000435201 TMPRSS5Q9H3S3 457 aa13.67□□□□□ -0.22
LIMK1-203ENST00000435201 TMEM242Q9NWH2 141 aa13.67□□□□□ -0.22
LIMK1-203ENST00000435201 DMXL2Q8TDJ6 3036 aa13.67□□□□□ -0.22
LIMK1-203ENST00000435201 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.66□□□□□ -0.22
LIMK1-203ENST00000435201 FNDC10F2Z333 226 aa13.66□□□□□ -0.22
LIMK1-203ENST00000435201 ATP5IP56385 69 aaPredicted RBP13.66□□□□□ -0.22
LIMK1-203ENST00000435201 PRCDQ00LT1 54 aa13.66□□□□□ -0.22
LIMK1-203ENST00000435201 WDR25Q64LD2 544 aaPredicted RBP13.66□□□□□ -0.22
LIMK1-203ENST00000435201 LYPD2Q6UXB3 125 aa13.66□□□□□ -0.22
LIMK1-203ENST00000435201 C1QL4Q86Z23 238 aa13.66□□□□□ -0.22
LIMK1-203ENST00000435201 LINC00311Q8N616 119 aa13.66□□□□□ -0.22
LIMK1-203ENST00000435201 MGST2Q99735 147 aa13.66□□□□□ -0.22
LIMK1-203ENST00000435201 PLEKHA3Q9HB20 300 aa13.66□□□□□ -0.22
LIMK1-203ENST00000435201 NAT8Q9UHE5 227 aa13.66□□□□□ -0.22
LIMK1-203ENST00000435201 PCNX1Q96RV3 2341 aa13.66□□□□□ -0.22
LIMK1-203ENST00000435201 NBEAQ8NFP9 2946 aa13.66□□□□□ -0.22
LIMK1-203ENST00000435201 IGHV1-69-2A0A0G2JMI3 117 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 J3QR06 171 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 DVL1O14640 695 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 KBTBD11O94819 623 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 IGKV1-16P04430 117 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 ZNF596Q8TC21 504 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 GGTLC1Q9BX51 225 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 MRPL20Q9BYC9 149 aaKnown RBP13.65□□□□□ -0.22
LIMK1-203ENST00000435201 ZNRD1Q9P1U0 126 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 LSM4Q9Y4Z0 139 aaKnown RBP13.65□□□□□ -0.22
LIMK1-203ENST00000435201 A0A1W2PPV4 95 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 CA2P00918 260 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 S100A6P06703 90 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 CHRNB4P30926 498 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 NHLH1Q02575 133 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 KLRB1Q12918 225 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 CYP2G1PQ6ZSU1 146 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 IQCF2Q8IXL9 164 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 NEIL1Q96FI4 390 aaPredicted RBP13.65□□□□□ -0.22
LIMK1-203ENST00000435201 SMIM7Q9BQ49 75 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 CTSZQ9UBR2 303 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 RAXQ9Y2V3 346 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 PXMP4Q9Y6I8 212 aa13.65□□□□□ -0.22
LIMK1-203ENST00000435201 LOXP28300 417 aaPredicted RBP13.64□□□□□ -0.23
LIMK1-203ENST00000435201 ERVFRD-1P60508 538 aa13.64□□□□□ -0.23
LIMK1-203ENST00000435201 RAB31Q13636 194 aa13.64□□□□□ -0.23
LIMK1-203ENST00000435201 ELOBQ15370 118 aa13.64□□□□□ -0.23
LIMK1-203ENST00000435201 TEPPQ6URK8 271 aa13.64□□□□□ -0.23
LIMK1-203ENST00000435201 LINC00518Q8N0U6 118 aa13.64□□□□□ -0.23
LIMK1-203ENST00000435201 ST6GALNAC3Q8NDV1 305 aa13.64□□□□□ -0.23
LIMK1-203ENST00000435201 OR5AN1Q8NGI8 311 aa13.64□□□□□ -0.23
LIMK1-203ENST00000435201 OR10X1Q8NGY0 326 aa13.64□□□□□ -0.23
LIMK1-203ENST00000435201 OR4F5Q8NH21 305 aa13.64□□□□□ -0.23
LIMK1-203ENST00000435201 OR5B3Q8NH48 314 aa13.64□□□□□ -0.23
LIMK1-203ENST00000435201 TMEM186Q96B77 213 aa13.64□□□□□ -0.23
LIMK1-203ENST00000435201 OR4F4Q96R69 305 aa13.64□□□□□ -0.23
LIMK1-203ENST00000435201 HINT2Q9BX68 163 aa13.64□□□□□ -0.23
LIMK1-203ENST00000435201 SRRM4A7MD48 611 aaKnown RBP13.63□□□□□ -0.23
LIMK1-203ENST00000435201 H0YJW9 148 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 YIF1AO95070 293 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 SAA1P0DJI8 122 aaPredicted RBP13.63□□□□□ -0.23
LIMK1-203ENST00000435201 AKR1D1P51857 326 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 TMEM177Q53S58 311 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 ARSJQ5FYB0 599 aaPredicted RBP13.63□□□□□ -0.23
LIMK1-203ENST00000435201 CTDSP1Q9GZU7 261 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 A0A087X0M5 115 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 TRBV23-1A0A0A0MS06 115 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 A0A1B0GX30 115 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 FAM90A27PA6NNH2 459 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 PLA2G5P39877 138 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 DLX6P56179 175 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 TMEM241Q24JQ0 296 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 TMEM155Q4W5P6 130 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 PDPNQ86YL7 162 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 Q8WTZ3 238 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 HARBI1Q96MB7 349 aa13.63□□□□□ -0.23
LIMK1-203ENST00000435201 TLN1Q9Y490 2541 aaKnown RBP13.62□□□□□ -0.23
LIMK1-203ENST00000435201 TEX50A0A1B0GTY4 177 aa13.62□□□□□ -0.23
LIMK1-203ENST00000435201 CLDN34H7C241 214 aa13.62□□□□□ -0.23
LIMK1-203ENST00000435201 PAGE4O60829 102 aa13.62□□□□□ -0.23
LIMK1-203ENST00000435201 MYOD1P15172 320 aa13.62□□□□□ -0.23
LIMK1-203ENST00000435201 RND2P52198 227 aa13.62□□□□□ -0.23
LIMK1-203ENST00000435201 SNRPEP62304 92 aaKnown RBP13.62□□□□□ -0.23
LIMK1-203ENST00000435201 GCSAMLQ5JQS6 135 aa13.62□□□□□ -0.23
LIMK1-203ENST00000435201 MIC13Q5XKP0 118 aa13.62□□□□□ -0.23
LIMK1-203ENST00000435201 GATAD1Q8WUU5 269 aa13.62□□□□□ -0.23
LIMK1-203ENST00000435201 DCHS1Q96JQ0 3298 aa13.62□□□□□ -0.23
LIMK1-203ENST00000435201 C5orf52A6NGY3 159 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 CCL21O00585 134 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 DEFA4P12838 97 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 RPL35P42766 123 aaKnown RBP13.61□□□□□ -0.23
LIMK1-203ENST00000435201 RPS10P46783 165 aaKnown RBP13.61□□□□□ -0.23
LIMK1-203ENST00000435201 ZNF137PP52743 207 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 ZNF674Q2M3X9 581 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms