RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 CLN8Q9UBY8 286 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 NAT8Q9UHE5 227 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 FOXA2Q9Y261 457 aaPredicted RBP6.13□□□□□ -1.43
COL17A1-204ENST00000433822 ZNF257Q9Y2Q1 563 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 TANC2Q9HCD6 1990 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 CELSR2Q9HCU4 2923 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 SPENQ96T58 3664 aaKnown RBP6.12□□□□□ -1.43
COL17A1-204ENST00000433822 TRGV10A0A0A0MS01 117 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 A0A1W2PPE2 198 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 CEBPZOSA8MTT3 80 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 PRSS46E5RG02 174 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 INS-IGF2F8WCM5 200 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 MKRN2OSH3BPM6 223 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 M0R1B8 84 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 NXPH3O95157 252 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 FSTL3O95633 263 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 IL6RP08887 468 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-204ENST00000433822 TNFRSF1AP19438 455 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 OPRK1P41145 380 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 MEOX2P50222 304 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 RAB11AP62491 216 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 MEF2CQ06413 473 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-204ENST00000433822 ZNF816Q0VGE8 651 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-204ENST00000433822 ELOBQ15370 118 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 C17orf58Q2M2W7 97 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 DNLZQ5SXM8 178 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 WDR25Q64LD2 544 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-204ENST00000433822 NCR3LG1Q68D85 454 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 FAM180AQ6UWF9 173 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 TMEM108Q6UXF1 575 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 ETV3LQ6ZN32 361 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 TGIF2LYQ8IUE0 185 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 IQCF2Q8IXL9 164 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 FAM24BQ8N5W8 94 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 Q8N7P7 452 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 C8orf31Q8N9H6 132 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 LINC01356Q8N9X3 169 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 ZNF439Q8NDP4 499 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 ITLN1Q8WWA0 313 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 PYGO2Q9BRQ0 406 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 TMEM204Q9BSN7 226 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 TMEM14BQ9NUH8 114 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 CELSR1Q9NYQ6 3014 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 JKAMPQ9P055 326 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 RFNGQ9Y644 331 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 LINC00312Q9Y6C7 94 aa6.12□□□□□ -1.43
COL17A1-204ENST00000433822 HCFC1P51610 2035 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 C15orf61A6NNL5 157 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 F6UZH7 168 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 M0R1X1 148 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 PDE6DO43924 150 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 HRASP01112 189 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 IGKV1D-33P01593 117 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 IGKV1-33P01594 117 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 IGHV1-46P01743 117 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 CD99P14209 185 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 CD40P25942 277 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 CD1BP29016 333 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 ZNF83P51522 516 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 CD81P60033 236 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 HSPE1P61604 102 aaKnown RBP6.11□□□□□ -1.43
COL17A1-204ENST00000433822 TNFAIP6P98066 277 aaPredicted RBP6.11□□□□□ -1.43
COL17A1-204ENST00000433822 EDDM3AQ14507 147 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 PRAMEF5Q5TYX0 476 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 OR8G2PQ6IF36 304 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 ACSM6Q6P461 480 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 LCN15Q6UWW0 184 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 MOGAT3Q86VF5 341 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 C1orf87Q8N0U7 546 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 ZNF808Q8N4W9 903 aaPredicted RBP6.11□□□□□ -1.43
COL17A1-204ENST00000433822 OR10G9Q8NGN4 311 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 OR10G7Q8NGN6 311 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 OR4A16Q8NH70 328 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 ZNF596Q8TC21 504 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 ISOC2Q96AB3 205 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 ANAPC16Q96DE5 110 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 FKBP11Q9NYL4 201 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 IDI2-AS1Q9NZ38 188 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 PRNDQ9UKY0 176 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 ZNF835Q9Y2P0 537 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 LSM4Q9Y4Z0 139 aaKnown RBP6.11□□□□□ -1.43
COL17A1-204ENST00000433822 DSCAMO60469 2012 aa6.11□□□□□ -1.43
COL17A1-204ENST00000433822 PCNX1Q96RV3 2341 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 OTOGQ6ZRI0 2925 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 TRAV38-1A0A0B4J264 116 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 hADV38S2A0JD32 116 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 NKX6-3A6NJ46 265 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 ZFP92A6NM28 416 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 ZNF727A8MUV8 499 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 VSTM5A8MXK1 200 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 FCGR3BO75015 233 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 S100A9P06702 114 aaKnown RBP6.1□□□□□ -1.43
COL17A1-204ENST00000433822 OR9G9P0C7N8 305 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 CCKARP32238 428 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 AKR1C3P42330 323 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 CDC34P49427 236 aaPredicted RBP6.1□□□□□ -1.43
COL17A1-204ENST00000433822 TDGF1P3P51864 188 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 SNRPEP62304 92 aaKnown RBP6.1□□□□□ -1.43
COL17A1-204ENST00000433822 TMEM241Q24JQ0 296 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 FFAR4Q5NUL3 377 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms