RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 PNKDQ8N490 385 aa11.26□□□□□ -0.61
COL6A3-207ENST00000433762 NEUROG1Q92886 237 aa11.26□□□□□ -0.61
COL6A3-207ENST00000433762 RHOVQ96L33 236 aa11.26□□□□□ -0.61
COL6A3-207ENST00000433762 C19orf24Q9BVV8 132 aa11.26□□□□□ -0.61
COL6A3-207ENST00000433762 ENY2Q9NPA8 101 aa11.26□□□□□ -0.61
COL6A3-207ENST00000433762 TRGV10A0A0A0MS01 117 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 GZMBP10144 247 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 GPX4P36969 197 aaPredicted RBP11.25□□□□□ -0.61
COL6A3-207ENST00000433762 YPEL3P61236 119 aaPredicted RBP11.25□□□□□ -0.61
COL6A3-207ENST00000433762 MSMPQ1L6U9 139 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 SEM1Q6ZVN7 128 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 RNF7Q9UBF6 113 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 IL19Q9UHD0 177 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 TRBV23-1A0A0A0MS06 115 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 GCHFRP30047 84 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 PRR20EP86478 221 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 PRR20CP86479 221 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 PRR20DP86480 221 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 PRR20BP86481 221 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 PRR20AP86496 221 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 HOXA4Q00056 320 aaPredicted RBP11.25□□□□□ -0.61
COL6A3-207ENST00000433762 RTL8BQ17RB0 113 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 CT45A1Q5HYN5 189 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 MIC13Q5XKP0 118 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 STUMQ69YW2 141 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 OR4A47Q6IF82 309 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 SSX9Q7RTT3 188 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 MOGAT3Q86VF5 341 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 ZADH2Q8N4Q0 377 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 CT45A3Q8NHU0 189 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 SLC35E1Q96K37 410 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 UHRF2Q96PU4 802 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 FUT9Q9Y231 359 aa11.25□□□□□ -0.61
COL6A3-207ENST00000433762 TIMP3P35625 211 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 SELENOVP59797 346 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 RPS16P62249 146 aaKnown RBP11.24□□□□□ -0.61
COL6A3-207ENST00000433762 GCSAMLQ5JQS6 135 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 FAM78BQ5VT40 261 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 C1orf159Q96HA4 380 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 FKBP11Q9NYL4 201 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 ELOVL5Q9NYP7 299 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 IDI2-AS1Q9NZ38 188 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 SAA2-SAA4A0A096LPE2 208 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 SPAARA0A1B0GVQ0 90 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 FTH1P19P0C7X4 201 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 SAA2P0DJI9 122 aaPredicted RBP11.24□□□□□ -0.61
COL6A3-207ENST00000433762 EFNB3Q15768 340 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 LTC4SQ16873 150 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 ARSJQ5FYB0 599 aaPredicted RBP11.24□□□□□ -0.61
COL6A3-207ENST00000433762 ASCL5Q7RTU5 278 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 ABHD12Q8N2K0 398 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 STPG3Q8N7X2 389 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 ZNRF1Q8ND25 227 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 PATZ1Q9HBE1 687 aaKnown RBP11.24□□□□□ -0.61
COL6A3-207ENST00000433762 TMEM167BQ9NRX6 74 aa11.24□□□□□ -0.61
COL6A3-207ENST00000433762 CHRNA7P36544 502 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 MRPS11P82912 194 aaKnown RBP11.23□□□□□ -0.61
COL6A3-207ENST00000433762 PRCDQ00LT1 54 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 TEX38Q6PEX7 206 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 LRP11Q86VZ4 500 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 GBGT1Q8N5D6 347 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 BEND2Q8NDZ0 799 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 ITLN1Q8WWA0 313 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 C14orf144Q96I85 54 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 ZFHX2Q9C0A1 2572 aaPredicted RBP11.23□□□□□ -0.61
COL6A3-207ENST00000433762 TRAV3A0A0B4J244 114 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 INS-IGF2F8WCM5 200 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 DSCAMO60469 2012 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 TNFSF4P23510 183 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 ZNF83P51522 516 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 UBE2G2P60604 165 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 TEX36Q5VZQ5 186 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 OR10G8Q8NGN5 311 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 TRAPPC1Q9Y5R8 145 aa11.23□□□□□ -0.61
COL6A3-207ENST00000433762 RIF1Q5UIP0 2472 aaKnown RBP11.22□□□□□ -0.61
COL6A3-207ENST00000433762 TRBV9A0A0B4J1U6 114 aa11.22□□□□□ -0.61
COL6A3-207ENST00000433762 A0A0U1RQK1 487 aa11.22□□□□□ -0.61
COL6A3-207ENST00000433762 ZNF320A2RRD8 509 aa11.22□□□□□ -0.61
COL6A3-207ENST00000433762 M0R1B8 84 aa11.22□□□□□ -0.61
COL6A3-207ENST00000433762 SLC31A2O15432 143 aa11.22□□□□□ -0.61
COL6A3-207ENST00000433762 DEFA4P12838 97 aa11.22□□□□□ -0.61
COL6A3-207ENST00000433762 SELENOTP62341 195 aa11.22□□□□□ -0.61
COL6A3-207ENST00000433762 IQCJQ1A5X6 159 aa11.22□□□□□ -0.61
COL6A3-207ENST00000433762 C2orf83Q53S99 150 aa11.22□□□□□ -0.61
COL6A3-207ENST00000433762 ZNF788Q6ZQV5 615 aa11.22□□□□□ -0.61
COL6A3-207ENST00000433762 SLC25A48Q6ZT89 311 aaKnown RBP11.22□□□□□ -0.61
COL6A3-207ENST00000433762 OR5B3Q8NH48 314 aa11.22□□□□□ -0.61
COL6A3-207ENST00000433762 BET1LQ9NYM9 111 aa11.22□□□□□ -0.61
COL6A3-207ENST00000433762 SLC45A2Q9UMX9 530 aa11.22□□□□□ -0.61
COL6A3-207ENST00000433762 TRBV20OR9-2A0A075B6H5 130 aa11.21□□□□□ -0.61
COL6A3-207ENST00000433762 IGHV3OR15-7A0A075B7D8 119 aa11.21□□□□□ -0.61
COL6A3-207ENST00000433762 A0A087X0M5 115 aa11.21□□□□□ -0.61
COL6A3-207ENST00000433762 A0A1B0GX30 115 aa11.21□□□□□ -0.61
COL6A3-207ENST00000433762 A8MXE2 369 aa11.21□□□□□ -0.61
COL6A3-207ENST00000433762 UPK2O00526 184 aa11.21□□□□□ -0.61
COL6A3-207ENST00000433762 DLL1O00548 723 aa11.21□□□□□ -0.61
COL6A3-207ENST00000433762 OR10J4P0C629 311 aa11.21□□□□□ -0.61
COL6A3-207ENST00000433762 RPL19P84098 196 aaKnown RBP11.21□□□□□ -0.61
COL6A3-207ENST00000433762 COX19Q49B96 90 aa11.21□□□□□ -0.61
COL6A3-207ENST00000433762 C1orf185Q5T7R7 199 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms