RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 DDB2Q92466 427 aa15.23■□□□□ 0.03
CHD1L-204ENST00000431239 PITPNC1Q9UKF7 332 aa15.23■□□□□ 0.03
CHD1L-204ENST00000431239 TGOLN2O43493 480 aa15.22■□□□□ 0.03
CHD1L-204ENST00000431239 MRPS11P82912 194 aaKnown RBP15.22■□□□□ 0.03
CHD1L-204ENST00000431239 C1orf159Q96HA4 380 aa15.22■□□□□ 0.03
CHD1L-204ENST00000431239 SEPSECSQ9HD40 501 aaKnown RBP15.22■□□□□ 0.03
CHD1L-204ENST00000431239 TRGV10A0A0A0MS01 117 aa15.22■□□□□ 0.03
CHD1L-204ENST00000431239 KBTBD11-OT1A0A1B0GTJ5 212 aa15.22■□□□□ 0.03
CHD1L-204ENST00000431239 SCO2A0A1W2PP80 73 aa15.22■□□□□ 0.03
CHD1L-204ENST00000431239 C15orf61A6NNL5 157 aa15.22■□□□□ 0.03
CHD1L-204ENST00000431239 CFHR2P36980 270 aa15.22■□□□□ 0.03
CHD1L-204ENST00000431239 OPRK1P41145 380 aa15.22■□□□□ 0.03
CHD1L-204ENST00000431239 TCF23Q7RTU1 214 aa15.22■□□□□ 0.03
CHD1L-204ENST00000431239 TRBV20OR9-2A0A075B6H5 130 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 RBFOX2O43251 390 aaKnown RBP eCLIP15.21■□□□□ 0.033e-13■■■■□ 26.2
CHD1L-204ENST00000431239 NPY1RP25929 384 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 AARDQ4LEZ3 155 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 SLC24A4Q8NFF2 622 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 RND1Q92730 232 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 PYGO2Q9BRQ0 406 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 PRO1933Q9H354 126 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 PRDM13Q9H4Q3 707 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 RNF7Q9UBF6 113 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 ACTL6BO94805 426 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 CA2P00918 260 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 IGHV1-46P01743 117 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 CCL8P80075 99 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 CR1LQ2VPA4 569 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 MOB3BQ86TA1 216 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 C1orf174Q8IYL3 243 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 ANAPC16Q96DE5 110 aa15.21■□□□□ 0.03
CHD1L-204ENST00000431239 DYSFO75923 2080 aa15.21■□□□□ 0.02
CHD1L-204ENST00000431239 ZNF318Q5VUA4 2279 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 PDE6DO43924 150 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 IGKV1-16P04430 117 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 IL6RP08887 468 aaPredicted RBP15.2■□□□□ 0.02
CHD1L-204ENST00000431239 RAB7AP51149 207 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 TMEM183AQ8IXX5 376 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 WFIKKN1Q96NZ8 548 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 ENY2Q9NPA8 101 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 CUL9Q8IWT3 2517 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 FAM90A9PA6NNJ1 464 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 CGB3P0DN86 165 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 CGB7P0DN87 165 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 STPG3Q8N7X2 389 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 FAM169BQ8N8A8 192 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 OR1P1Q8NH06 330 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 OR52E5Q8NH55 327 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 SH3BGRL2Q9UJC5 107 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 PTPRZ1P23471 2315 aaPredicted RBP15.2■□□□□ 0.02
CHD1L-204ENST00000431239 MPDU1O75352 247 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 FOXH1O75593 365 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 CEACAM4O75871 244 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 C1orf185Q5T7R7 199 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 IDI2-AS1Q9NZ38 188 aa15.2■□□□□ 0.02
CHD1L-204ENST00000431239 YTHDF2Q9Y5A9 579 aaKnown RBP15.2■□□□□ 0.02
CHD1L-204ENST00000431239 VENTXO95231 258 aa15.19■□□□□ 0.02
CHD1L-204ENST00000431239 AMBPP02760 352 aa15.19■□□□□ 0.02
CHD1L-204ENST00000431239 NDUFB7P17568 137 aa15.19■□□□□ 0.02
CHD1L-204ENST00000431239 IGFBP2P18065 325 aa15.19■□□□□ 0.02
CHD1L-204ENST00000431239 GAFA1Q96PS6 74 aa15.19■□□□□ 0.02
CHD1L-204ENST00000431239 KCNIP2Q9NS61 270 aa15.19■□□□□ 0.02
CHD1L-204ENST00000431239 IGLV3-9A0A075B6K5 115 aa15.19■□□□□ 0.02
CHD1L-204ENST00000431239 TMPRSS2O15393 492 aa15.19■□□□□ 0.02
CHD1L-204ENST00000431239 STAG3L2P0CL84 134 aa15.19■□□□□ 0.02
CHD1L-204ENST00000431239 STAG3L3P0CL85 134 aa15.19■□□□□ 0.02
CHD1L-204ENST00000431239 HIST1H1BP16401 226 aaKnown RBP15.19■□□□□ 0.02
CHD1L-204ENST00000431239 RAB1CQ92928 201 aa15.19■□□□□ 0.02
CHD1L-204ENST00000431239 NPVFQ9HCQ7 196 aa15.19■□□□□ 0.02
CHD1L-204ENST00000431239 APC2O95996 2303 aa15.18■□□□□ 0.02
CHD1L-204ENST00000431239 IL3RAP26951 378 aa15.18■□□□□ 0.02
CHD1L-204ENST00000431239 KIR2DS2P43631 304 aa15.18■□□□□ 0.02
CHD1L-204ENST00000431239 THBS3P49746 956 aa15.18■□□□□ 0.02
CHD1L-204ENST00000431239 SELENOVP59797 346 aa15.18■□□□□ 0.02
CHD1L-204ENST00000431239 STUMQ69YW2 141 aa15.18■□□□□ 0.02
CHD1L-204ENST00000431239 TEPPQ6URK8 271 aa15.18■□□□□ 0.02
CHD1L-204ENST00000431239 ZCCHC14Q8WYQ9 949 aaKnown RBP15.18■□□□□ 0.02
CHD1L-204ENST00000431239 ZNF320A2RRD8 509 aa15.18■□□□□ 0.02
CHD1L-204ENST00000431239 CXorf1O96002 111 aa15.18■□□□□ 0.02
CHD1L-204ENST00000431239 EFNB3Q15768 340 aa15.18■□□□□ 0.02
CHD1L-204ENST00000431239 LRFN3Q9BTN0 628 aa15.18■□□□□ 0.02
CHD1L-204ENST00000431239 OR51B2Q9Y5P1 312 aa15.18■□□□□ 0.02
CHD1L-204ENST00000431239 HSPE1P61604 102 aaKnown RBP15.17■□□□□ 0.02
CHD1L-204ENST00000431239 KCNIP4Q6PIL6 250 aa15.17■□□□□ 0.02
CHD1L-204ENST00000431239 TMEM14BQ9NUH8 114 aa15.17■□□□□ 0.02
CHD1L-204ENST00000431239 LSM4Q9Y4Z0 139 aaKnown RBP15.17■□□□□ 0.02
CHD1L-204ENST00000431239 A0A1B0GUS0 222 aa15.17■□□□□ 0.02
CHD1L-204ENST00000431239 F6UZH7 168 aa15.17■□□□□ 0.02
CHD1L-204ENST00000431239 GGCTO75223 188 aaKnown RBP15.17■□□□□ 0.02
CHD1L-204ENST00000431239 GATA2P23769 480 aaPredicted RBP15.17■□□□□ 0.02
CHD1L-204ENST00000431239 NUBP1P53384 320 aa15.17■□□□□ 0.02
CHD1L-204ENST00000431239 OR4P4Q8NGL7 312 aa15.17■□□□□ 0.02
CHD1L-204ENST00000431239 TACC2O95359 2948 aa15.17■□□□□ 0.02
CHD1L-204ENST00000431239 CEP295Q9C0D2 2601 aa15.17■□□□□ 0.02
CHD1L-204ENST00000431239 ZNF729A6NN14 1252 aaPredicted RBP15.16■□□□□ 0.02
CHD1L-204ENST00000431239 SGMS2Q8NHU3 365 aa15.16■□□□□ 0.02
CHD1L-204ENST00000431239 TP53TG5Q9Y2B4 290 aa15.16■□□□□ 0.02
CHD1L-204ENST00000431239 TPRP12270 2363 aaKnown RBP15.16■□□□□ 0.02
CHD1L-204ENST00000431239 TRGV8A0A0C4DH27 118 aa15.16■□□□□ 0.02
CHD1L-204ENST00000431239 SRRM4A7MD48 611 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms