RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 C9JQL5 133 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 RRHO14718 337 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 RNF224P0DH78 156 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 SNCAP37840 140 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 PCP4P48539 62 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 GNB2P62879 340 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 DEFA5Q01523 94 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 OR52E5Q8NH55 327 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 BBC3Q96PG8 261 aaPredicted RBP13.54□□□□□ -0.24
USHBP1-203ENST00000431146 DOPEY1Q5JWR5 2465 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 ARG1P05089 322 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 CCL20P78556 96 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 POU2AF1Q16633 256 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 C21orf62-AS1Q17RA5 79 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 DHRS7BQ6IAN0 325 aaPredicted RBP13.53□□□□□ -0.24
USHBP1-203ENST00000431146 ATRAIDQ6UW56 229 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 TGIF2LXQ8IUE1 241 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 C8orf31Q8N9H6 132 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 SFT2D1Q8WV19 159 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 TAF15Q92804 592 aaKnown RBP eCLIP13.53□□□□□ -0.24
USHBP1-203ENST00000431146 HIPK2Q9H2X6 1198 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 UQCC1Q9NVA1 299 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 FOXA2Q9Y261 457 aaPredicted RBP13.53□□□□□ -0.24
USHBP1-203ENST00000431146 OR51B2Q9Y5P1 312 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 PLXNB1O43157 2135 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 WNK2Q9Y3S1 2297 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 ZNF462Q96JM2 2506 aa13.53□□□□□ -0.24
USHBP1-203ENST00000431146 RNASEK-C17orf49H0YIS7 233 aa13.52□□□□□ -0.24
USHBP1-203ENST00000431146 TMEM170AQ8WVE7 144 aa13.52□□□□□ -0.24
USHBP1-203ENST00000431146 CLCC1Q96S66 551 aa13.52□□□□□ -0.24
USHBP1-203ENST00000431146 UPK2O00526 184 aa13.52□□□□□ -0.25
USHBP1-203ENST00000431146 ELLP55199 621 aaPredicted RBP13.52□□□□□ -0.25
USHBP1-203ENST00000431146 HSPE1P61604 102 aaKnown RBP13.52□□□□□ -0.25
USHBP1-203ENST00000431146 PDLIM3Q53GG5 364 aaPredicted RBP13.52□□□□□ -0.25
USHBP1-203ENST00000431146 LHX4Q969G2 390 aa13.52□□□□□ -0.25
USHBP1-203ENST00000431146 PINX1Q96BK5 328 aaKnown RBP13.52□□□□□ -0.25
USHBP1-203ENST00000431146 FLYWCH2Q96CP2 140 aaKnown RBP13.52□□□□□ -0.25
USHBP1-203ENST00000431146 RITA1Q96K30 269 aa13.52□□□□□ -0.25
USHBP1-203ENST00000431146 TMEM147Q9BVK8 224 aa13.52□□□□□ -0.25
USHBP1-203ENST00000431146 PATZ1Q9HBE1 687 aaKnown RBP13.52□□□□□ -0.25
USHBP1-203ENST00000431146 EIF3GO75821 320 aaKnown RBP eCLIP13.51□□□□□ -0.25
USHBP1-203ENST00000431146 IL6RP08887 468 aaPredicted RBP13.51□□□□□ -0.25
USHBP1-203ENST00000431146 OR8U8P0C7N1 319 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 ZNF137PP52743 207 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 ARF6P62330 175 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 C8orf46Q8TAG6 207 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 OSR1Q8TAX0 266 aaPredicted RBP13.51□□□□□ -0.25
USHBP1-203ENST00000431146 TCEAL7Q9BRU2 100 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 SIRT7Q9NRC8 400 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 RPRMQ9NS64 109 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 CSMD1Q96PZ7 3565 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 A0A1W2PPH5 198 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 IGLV1-47P01700 117 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 LIPFP07098 398 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 FGF7P21781 194 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 GPR6P46095 362 aaPredicted RBP13.51□□□□□ -0.25
USHBP1-203ENST00000431146 HLA-DRB5Q30154 266 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 SPSB3Q6PJ21 355 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 SSBP3Q9BWW4 388 aaPredicted RBP13.51□□□□□ -0.25
USHBP1-203ENST00000431146 CLEC7AQ9BXN2 247 aa13.51□□□□□ -0.25
USHBP1-203ENST00000431146 EIF5A2Q9GZV4 153 aaKnown RBP13.51□□□□□ -0.25
USHBP1-203ENST00000431146 ENSAO43768 121 aaKnown RBP13.5□□□□□ -0.25
USHBP1-203ENST00000431146 CD5P06127 495 aa13.5□□□□□ -0.25
USHBP1-203ENST00000431146 GUCA2BQ16661 112 aa13.5□□□□□ -0.25
USHBP1-203ENST00000431146 GUK1Q16774 197 aa13.5□□□□□ -0.25
USHBP1-203ENST00000431146 TMEM177Q53S58 311 aa13.5□□□□□ -0.25
USHBP1-203ENST00000431146 FAM71F2Q6NXP2 309 aa13.5□□□□□ -0.25
USHBP1-203ENST00000431146 ETV3LQ6ZN32 361 aa13.5□□□□□ -0.25
USHBP1-203ENST00000431146 PNKDQ8N490 385 aa13.5□□□□□ -0.25
USHBP1-203ENST00000431146 Q8N7P7 452 aa13.5□□□□□ -0.25
USHBP1-203ENST00000431146 LY6G5BQ8NDX9 201 aa13.5□□□□□ -0.25
USHBP1-203ENST00000431146 OR4C13Q8NGP0 309 aa13.5□□□□□ -0.25
USHBP1-203ENST00000431146 SCRT1Q9BWW7 348 aa13.5□□□□□ -0.25
USHBP1-203ENST00000431146 PRNDQ9UKY0 176 aa13.5□□□□□ -0.25
USHBP1-203ENST00000431146 SMCO3A2RU48 225 aa13.49□□□□□ -0.25
USHBP1-203ENST00000431146 KBTBD11O94819 623 aa13.49□□□□□ -0.25
USHBP1-203ENST00000431146 SFTA3P0C7M3 94 aa13.49□□□□□ -0.25
USHBP1-203ENST00000431146 DVL1P1P54792 670 aaPredicted RBP13.49□□□□□ -0.25
USHBP1-203ENST00000431146 PRRX1P54821 245 aa13.49□□□□□ -0.25
USHBP1-203ENST00000431146 ATP6V1FQ16864 119 aa13.49□□□□□ -0.25
USHBP1-203ENST00000431146 SSX7Q7RTT5 188 aa13.49□□□□□ -0.25
USHBP1-203ENST00000431146 PUSL1Q8N0Z8 303 aaKnown RBP13.49□□□□□ -0.25
USHBP1-203ENST00000431146 PSMG3Q9BT73 122 aaPredicted RBP13.49□□□□□ -0.25
USHBP1-203ENST00000431146 BET1LQ9NYM9 111 aa13.49□□□□□ -0.25
USHBP1-203ENST00000431146 WASHC3Q9Y3C0 194 aa13.49□□□□□ -0.25
USHBP1-203ENST00000431146 TEX50A0A1B0GTY4 177 aa13.49□□□□□ -0.25
USHBP1-203ENST00000431146 BUB1B-PAK6H3BSN5 160 aa13.49□□□□□ -0.25
USHBP1-203ENST00000431146 GPX4P36969 197 aaPredicted RBP13.49□□□□□ -0.25
USHBP1-203ENST00000431146 PDPNQ86YL7 162 aa13.49□□□□□ -0.25
USHBP1-203ENST00000431146 PARD6GQ9BYG4 376 aaPredicted RBP13.49□□□□□ -0.25
USHBP1-203ENST00000431146 ENY2Q9NPA8 101 aa13.49□□□□□ -0.25
USHBP1-203ENST00000431146 LOC105371242A0A075B767 164 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 FAM157AC9JC47 383 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 IL3RAP26951 378 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 TAS2R60P59551 318 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 RPP30P78346 268 aaKnown RBP13.48□□□□□ -0.25
USHBP1-203ENST00000431146 ZNF726P1Q15940 193 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 OR10W1Q8NGF6 305 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 OR4P4Q8NGL7 312 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 IGFBPL1Q8WX77 278 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms