RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 CT45A5P0DMU8 189 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 CT45A7P0DMV0 189 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 IRF2P14316 349 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 GRNP28799 593 aaKnown RBP11.42□□□□□ -0.58
RBM39-212ENST00000429968 MEOX2P50222 304 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 CD81P60033 236 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 ATP6V1FQ16864 119 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 OR10G4Q8NGN3 311 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 OR10G9Q8NGN4 311 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 OR10G7Q8NGN6 311 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 CORO2AQ92828 525 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 LHX4Q969G2 390 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 RHOVQ96L33 236 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 SAP30LQ9HAJ7 183 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 CTSZQ9UBR2 303 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 RPUSD1Q9UJJ7 312 aaKnown RBP11.42□□□□□ -0.58
RBM39-212ENST00000429968 TCF19Q9Y242 345 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 SPTA1P02549 2419 aa11.42□□□□□ -0.58
RBM39-212ENST00000429968 ZNF729A6NN14 1252 aaPredicted RBP11.41□□□□□ -0.58
RBM39-212ENST00000429968 C15orf61A6NNL5 157 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 PLXNB1O43157 2135 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 OR2C1O95371 312 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 MT-ND4LP03901 98 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 RAB7AP51149 207 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 OR4S2Q8NH73 311 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 CCL17Q92583 94 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 RND1Q92730 232 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 SLC39A9Q9NUM3 307 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 SLC25A10Q9UBX3 287 aaPredicted RBP11.41□□□□□ -0.58
RBM39-212ENST00000429968 FAM90A9PA6NNJ1 464 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 TMEM178BH3BS89 294 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 IFNA10P01566 189 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 RAB5AP20339 215 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 ERVK-16P61578 105 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 DIAPH2-AS1Q14236 149 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 CDSNQ15517 529 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 PDLIM3Q53GG5 364 aaPredicted RBP11.41□□□□□ -0.58
RBM39-212ENST00000429968 SLC25A48Q6ZT89 311 aaKnown RBP11.41□□□□□ -0.58
RBM39-212ENST00000429968 RAB24Q969Q5 203 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 HEYLQ9NQ87 328 aaPredicted RBP11.41□□□□□ -0.58
RBM39-212ENST00000429968 WDR83OSQ9Y284 106 aa11.41□□□□□ -0.58
RBM39-212ENST00000429968 TRAV38-1A0A0B4J264 116 aa11.4□□□□□ -0.58
RBM39-212ENST00000429968 TNFRSF13BO14836 293 aaPredicted RBP11.4□□□□□ -0.58
RBM39-212ENST00000429968 CXCL1P09341 107 aa11.4□□□□□ -0.58
RBM39-212ENST00000429968 RNF224P0DH78 156 aa11.4□□□□□ -0.58
RBM39-212ENST00000429968 TNFRSF1AP19438 455 aa11.4□□□□□ -0.58
RBM39-212ENST00000429968 CD1BP29016 333 aa11.4□□□□□ -0.58
RBM39-212ENST00000429968 TMEM200BQ69YZ2 307 aa11.4□□□□□ -0.58
RBM39-212ENST00000429968 TREML4Q6UXN2 200 aa11.4□□□□□ -0.58
RBM39-212ENST00000429968 TVP23CQ96ET8 276 aa11.4□□□□□ -0.58
RBM39-212ENST00000429968 SSX3Q99909 188 aa11.4□□□□□ -0.58
RBM39-212ENST00000429968 NIPSNAP3BQ9BS92 247 aa11.4□□□□□ -0.58
RBM39-212ENST00000429968 MS4A5Q9H3V2 200 aa11.4□□□□□ -0.58
RBM39-212ENST00000429968 URGCP-MRPS24S4R325 110 aa11.4□□□□□ -0.58
RBM39-212ENST00000429968 NAV3Q8IVL0 2385 aa11.4□□□□□ -0.59
RBM39-212ENST00000429968 YIF1AO95070 293 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 AGAP20933 346 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 THBS3P49746 956 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 OR52E5Q8NH55 327 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 Q8WTZ3 238 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 RNASE6Q93091 150 aaKnown RBP11.39□□□□□ -0.59
RBM39-212ENST00000429968 MGST2Q99735 147 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 TMEM14BQ9NUH8 114 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 ABCA4P78363 2273 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 CSMD1Q96PZ7 3565 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 CTXND1A0A1B0GTU2 59 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 SMCO3A2RU48 225 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 SIAH2O43255 324 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 REG1BP48304 166 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 DLX1P56177 255 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 SNRPEP62304 92 aaKnown RBP11.39□□□□□ -0.59
RBM39-212ENST00000429968 RPL31P62899 125 aaKnown RBP11.39□□□□□ -0.59
RBM39-212ENST00000429968 WDR25Q64LD2 544 aaPredicted RBP11.39□□□□□ -0.59
RBM39-212ENST00000429968 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.39□□□□□ -0.59
RBM39-212ENST00000429968 TMEM106BQ9NUM4 274 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 VAX2Q9UIW0 290 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 RAXQ9Y2V3 346 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 LINC00312Q9Y6C7 94 aa11.39□□□□□ -0.59
RBM39-212ENST00000429968 PPIAL4EA0A075B759 164 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 TRGV8A0A0C4DH27 118 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 PPIAL4DF5H284 164 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 PPIAL4FP0DN26 164 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 KIR2DS2P43631 304 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 ELOBQ15370 118 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 ARSJQ5FYB0 599 aaPredicted RBP11.38□□□□□ -0.59
RBM39-212ENST00000429968 NCMAPQ5T1S8 102 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 HEPN1Q6WQI6 88 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 LINC01560Q8TB33 94 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 UNKLQ9H9P5 680 aaKnown RBP11.38□□□□□ -0.59
RBM39-212ENST00000429968 PATZ1Q9HBE1 687 aaKnown RBP11.38□□□□□ -0.59
RBM39-212ENST00000429968 PPIAL4AQ9Y536 164 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 TGIF2-C20orf24A0A0A6YYL0 155 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 hADV38S2A0JD32 116 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 IL6RP08887 468 aaPredicted RBP11.38□□□□□ -0.59
RBM39-212ENST00000429968 MAS1LP35410 378 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 PRB3Q04118 309 aaPredicted RBP11.38□□□□□ -0.59
RBM39-212ENST00000429968 RNF212Q495C1 297 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 SLC35E3Q7Z769 313 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 MOB3BQ86TA1 216 aa11.38□□□□□ -0.59
RBM39-212ENST00000429968 OR5T1Q8NG75 326 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms