RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 OR13F1Q8NGS4 319 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 SECTM1Q8WVN6 248 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 MARC2Q969Z3 335 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 RRP15Q9Y3B9 282 aaKnown RBP11.19□□□□□ -0.62
MSH5-208ENST00000429846 ETV7Q9Y603 341 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 PPYP01298 95 aa11.18□□□□□ -0.62
MSH5-208ENST00000429846 IGHV3-23P01764 117 aa11.18□□□□□ -0.62
MSH5-208ENST00000429846 EDN2P20800 178 aa11.18□□□□□ -0.62
MSH5-208ENST00000429846 FCGR2CP31995 323 aa11.18□□□□□ -0.62
MSH5-208ENST00000429846 TAS2R31P59538 309 aa11.18□□□□□ -0.62
MSH5-208ENST00000429846 SPAG16Q8N0X2 631 aa11.18□□□□□ -0.62
MSH5-208ENST00000429846 SPARTQ8N0X7 666 aa11.18□□□□□ -0.62
MSH5-208ENST00000429846 OR52B4Q8NGK2 314 aa11.18□□□□□ -0.62
MSH5-208ENST00000429846 CACNG8Q8WXS5 425 aa11.18□□□□□ -0.62
MSH5-208ENST00000429846 SRSF8Q9BRL6 282 aaKnown RBP11.18□□□□□ -0.62
MSH5-208ENST00000429846 HRASLSQ9HDD0 168 aa11.18□□□□□ -0.62
MSH5-208ENST00000429846 THYN1Q9P016 225 aa11.18□□□□□ -0.62
MSH5-208ENST00000429846 TRAV25A0A0B4J276 109 aa11.17□□□□□ -0.62
MSH5-208ENST00000429846 ZNF320A2RRD8 509 aa11.17□□□□□ -0.62
MSH5-208ENST00000429846 TNFSF12O43508 249 aa11.17□□□□□ -0.62
MSH5-208ENST00000429846 HPRT1P00492 218 aa11.17□□□□□ -0.62
MSH5-208ENST00000429846 NQO2P16083 231 aa11.17□□□□□ -0.62
MSH5-208ENST00000429846 POU2AF1Q16633 256 aa11.17□□□□□ -0.62
MSH5-208ENST00000429846 THOC7Q6I9Y2 204 aaKnown RBP11.17□□□□□ -0.62
MSH5-208ENST00000429846 HOGA1Q86XE5 327 aa11.17□□□□□ -0.62
MSH5-208ENST00000429846 UXS1Q8NBZ7 420 aa11.17□□□□□ -0.62
MSH5-208ENST00000429846 BORCS5Q969J3 196 aa11.17□□□□□ -0.62
MSH5-208ENST00000429846 CCL28Q9NRJ3 127 aa11.17□□□□□ -0.62
MSH5-208ENST00000429846 MLXQ9UH92 298 aa11.17□□□□□ -0.62
MSH5-208ENST00000429846 S4R3C0 116 aa11.17□□□□□ -0.62
MSH5-208ENST00000429846 EPPK1P58107 5090 aaKnown RBP11.17□□□□□ -0.62
MSH5-208ENST00000429846 DNAH1Q9P2D7 4330 aa11.17□□□□□ -0.62
MSH5-208ENST00000429846 MFSD2BA6NFX1 497 aa11.16□□□□□ -0.62
MSH5-208ENST00000429846 CGB1A6NKQ9 187 aa11.16□□□□□ -0.62
MSH5-208ENST00000429846 CYB5BO43169 146 aa11.16□□□□□ -0.62
MSH5-208ENST00000429846 REG1AP05451 166 aa11.16□□□□□ -0.62
MSH5-208ENST00000429846 SDC2P34741 201 aa11.16□□□□□ -0.62
MSH5-208ENST00000429846 ELLP55199 621 aaPredicted RBP11.16□□□□□ -0.62
MSH5-208ENST00000429846 OR2B8PP59922 312 aa11.16□□□□□ -0.62
MSH5-208ENST00000429846 CD300LFQ8TDQ1 290 aa11.16□□□□□ -0.62
MSH5-208ENST00000429846 SLC25A38Q96DW6 304 aa11.16□□□□□ -0.62
MSH5-208ENST00000429846 GPHA2Q96T91 129 aa11.16□□□□□ -0.62
MSH5-208ENST00000429846 GGTLC1Q9BX51 225 aa11.16□□□□□ -0.62
MSH5-208ENST00000429846 COMMD5Q9GZQ3 224 aa11.16□□□□□ -0.62
MSH5-208ENST00000429846 MRPL27Q9P0M9 148 aaKnown RBP11.16□□□□□ -0.62
MSH5-208ENST00000429846 TRAV18A0A075B6X5 111 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 LOC102724200A0A096LPH7 203 aaPredicted RBP11.15□□□□□ -0.62
MSH5-208ENST00000429846 IGLC7A0M8Q6 106 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 TMEM127O75204 238 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 CLEC3BP05452 202 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 C8orf88P0DMB2 117 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 MYOD1P15172 320 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 CBX5P45973 191 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 BTNL8Q6UX41 500 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 RBPMS2Q6ZRY4 209 aaKnown RBP11.15□□□□□ -0.62
MSH5-208ENST00000429846 HSD17B13Q7Z5P4 300 aaPredicted RBP11.15□□□□□ -0.62
MSH5-208ENST00000429846 GVQW1Q8N7I0 195 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 ZNF502Q8TBZ5 544 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 YTHDF1Q9BYJ9 559 aaKnown RBP11.15□□□□□ -0.62
MSH5-208ENST00000429846 SLC5A7Q9GZV3 580 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 Q9H521 79 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 PLEKHA2Q9HB19 425 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 COMMD9Q9P000 198 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 UFC1Q9Y3C8 167 aa11.15□□□□□ -0.62
MSH5-208ENST00000429846 SULT1C2O00338 296 aa11.14□□□□□ -0.63
MSH5-208ENST00000429846 UPK2O00526 184 aa11.14□□□□□ -0.63
MSH5-208ENST00000429846 SCAF4O95104 1147 aaKnown RBP11.14□□□□□ -0.63
MSH5-208ENST00000429846 PTBP1P26599 531 aaKnown RBP eCLIP11.14□□□□□ -0.63
MSH5-208ENST00000429846 GPR183P32249 361 aa11.14□□□□□ -0.63
MSH5-208ENST00000429846 IDNKQ5T6J7 187 aa11.14□□□□□ -0.63
MSH5-208ENST00000429846 PLET1Q6UQ28 207 aa11.14□□□□□ -0.63
MSH5-208ENST00000429846 UNQ9165/PRO28630Q6UXU0 137 aa11.14□□□□□ -0.63
MSH5-208ENST00000429846 OR5AP2Q8NGF4 316 aa11.14□□□□□ -0.63
MSH5-208ENST00000429846 OR1L6Q8NGR2 347 aa11.14□□□□□ -0.63
MSH5-208ENST00000429846 VN1R17PQ8TDU5 208 aa11.14□□□□□ -0.63
MSH5-208ENST00000429846 GIMAP1Q8WWP7 306 aa11.14□□□□□ -0.63
MSH5-208ENST00000429846 QTRT1Q9BXR0 403 aaKnown RBP11.14□□□□□ -0.63
MSH5-208ENST00000429846 ZNF436Q9C0F3 470 aaPredicted RBP11.14□□□□□ -0.63
MSH5-208ENST00000429846 DIABLOQ9NR28 239 aa11.14□□□□□ -0.63
MSH5-208ENST00000429846 TMEM140Q9NV12 185 aa11.14□□□□□ -0.63
MSH5-208ENST00000429846 BIRC6Q9NR09 4857 aa11.14□□□□□ -0.63
MSH5-208ENST00000429846 FXYD4P59646 89 aa11.13□□□□□ -0.63
MSH5-208ENST00000429846 MXD1Q05195 221 aa11.13□□□□□ -0.63
MSH5-208ENST00000429846 TM4SF20Q53R12 229 aa11.13□□□□□ -0.63
MSH5-208ENST00000429846 AADACL3Q5VUY0 350 aa11.13□□□□□ -0.63
MSH5-208ENST00000429846 ZNF818PQ6ZRF7 136 aa11.13□□□□□ -0.63
MSH5-208ENST00000429846 GDPD1Q8N9F7 314 aa11.13□□□□□ -0.63
MSH5-208ENST00000429846 DMBX1Q8NFW5 382 aa11.13□□□□□ -0.63
MSH5-208ENST00000429846 OR5H6Q8NGV6 325 aa11.13□□□□□ -0.63
MSH5-208ENST00000429846 OR51H1Q8NH63 302 aa11.13□□□□□ -0.63
MSH5-208ENST00000429846 ATP6V0BQ99437 205 aa11.13□□□□□ -0.63
MSH5-208ENST00000429846 SPAG8Q99932 426 aaPredicted RBP11.13□□□□□ -0.63
MSH5-208ENST00000429846 OVOL2Q9BRP0 275 aa11.13□□□□□ -0.63
MSH5-208ENST00000429846 C5orf66Q9H5L9 145 aa11.13□□□□□ -0.63
MSH5-208ENST00000429846 AUNIPQ9H7T9 357 aa11.13□□□□□ -0.63
MSH5-208ENST00000429846 TGOLN2O43493 480 aa11.12□□□□□ -0.63
MSH5-208ENST00000429846 PTHLHP12272 177 aa11.12□□□□□ -0.63
MSH5-208ENST00000429846 ERVK-16P61578 105 aa11.12□□□□□ -0.63
MSH5-208ENST00000429846 ZNF585BQ52M93 769 aa11.12□□□□□ -0.63
MSH5-208ENST00000429846 ZNF773Q6PK81 442 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms