RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 J3QW42 95 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 HBZP02008 142 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 FOLR2P14207 255 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 CRYGSP22914 178 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 BTNL8Q6UX41 500 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 FGFBP3Q8TAT2 258 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 VN1R17PQ8TDU5 208 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 DAZAP1Q96EP5 407 aaKnown RBP8.97□□□□□ -0.97
TCOF1-204ENST00000427724 ABHD14AQ9BUJ0 271 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 RNF24Q9Y225 148 aa8.97□□□□□ -0.97
TCOF1-204ENST00000427724 FN1P02751 2386 aaKnown RBP8.96□□□□□ -0.97
TCOF1-204ENST00000427724 LDLRAD4O15165 306 aa8.96□□□□□ -0.97
TCOF1-204ENST00000427724 ZNF737O75373 536 aa8.96□□□□□ -0.97
TCOF1-204ENST00000427724 RHBDL1O75783 438 aa8.96□□□□□ -0.97
TCOF1-204ENST00000427724 CDS2O95674 445 aa8.96□□□□□ -0.97
TCOF1-204ENST00000427724 PCSK4Q6UW60 755 aa8.96□□□□□ -0.97
TCOF1-204ENST00000427724 OR9G1Q8NH87 305 aa8.96□□□□□ -0.97
TCOF1-204ENST00000427724 MRGPRFQ96AM1 343 aa8.96□□□□□ -0.97
TCOF1-204ENST00000427724 GRAMD2BQ96HH9 432 aa8.96□□□□□ -0.97
TCOF1-204ENST00000427724 MRPL13Q9BYD1 178 aaKnown RBP8.96□□□□□ -0.97
TCOF1-204ENST00000427724 IGKV3D-15A0A087WSY6 115 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 F8VVB4 439 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 F8VWA3 439 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 M0QZK8 103 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 GGCTO75223 188 aaKnown RBP8.96□□□□□ -0.98
TCOF1-204ENST00000427724 CSN1S1P47710 185 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 RANP62826 216 aaKnown RBP8.96□□□□□ -0.98
TCOF1-204ENST00000427724 TMEM252Q8N6L7 170 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 ATP5SQ99766 215 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 PRORYQ9H606 182 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 OR1A1Q9P1Q5 309 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 B4DEV8 164 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 C9JQL5 133 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 HLA-GP17693 338 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 CCKARP32238 428 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 FGF12P61328 243 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 RHOBP62745 196 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 Q6ZN92 141 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 OR5R1Q8NH85 324 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 FAM215AQ9Y5M1 114 aa8.96□□□□□ -0.98
TCOF1-204ENST00000427724 COL4A3Q01955 1670 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 IGKV1D-8A0A087WSZ0 117 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 CEACAM18A8MTB9 384 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 RAB29O14966 203 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 SLC25A16P16260 332 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 ASPHD2Q6ICH7 369 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 BRD3OSQ6XYD6 125 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 TUBA4BQ9H853 241 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 Q9N2K0 584 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 DPM3Q9P2X0 92 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 E7EQL1 145 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 ZNF843Q8N446 348 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 RAB40CQ96S21 281 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 TPPP3Q9BW30 176 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 NPFFR1Q9GZQ6 430 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 RPL36A-HNRNPH2H7BZ11 118 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 IGHV1-46P01743 117 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 CD5P06127 495 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 CD99P14209 185 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 CD24P25063 80 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 OR10J1P30954 320 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 C16orf82Q7Z2V1 217 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 OR1L1Q8NH94 360 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 NDUFAF3Q9BU61 184 aa8.95□□□□□ -0.98
TCOF1-204ENST00000427724 ZNF106Q9H2Y7 1883 aaKnown RBP8.95□□□□□ -0.98
TCOF1-204ENST00000427724 C5orf63A6NC05 138 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 F6UZH7 168 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 SOD3P08294 240 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 CCL3L1P16619 93 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 IZUMO4Q1ZYL8 232 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 OR4X2Q8NGF9 303 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 UHRF2Q96PU4 802 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 PKIBQ9C010 78 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 NAT8Q9UHE5 227 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 KIAA1324LA8MWY0 1029 aaPredicted RBP8.94□□□□□ -0.98
TCOF1-204ENST00000427724 IL24Q13007 206 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 CYTL1Q9NRR1 136 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 CLEC5AQ9NY25 188 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 SYNGR2O43760 224 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 SLC25A17O43808 307 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 OR7C2O60412 319 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 GCGP01275 180 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 COX5AP20674 150 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 B3GALT5-AS1P59052 145 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 PAFAH1B2P68402 229 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 SLC38A11Q08AI6 406 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 TMEM187Q14656 261 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 HEPN1Q6WQI6 88 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 C8orf46Q8TAG6 207 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 R3HDM4Q96D70 268 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 DKK4Q9UBT3 224 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 PSG2P11465 335 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 SLC25A6P12236 298 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 CEACAM8P31997 349 aaPredicted RBP8.94□□□□□ -0.98
TCOF1-204ENST00000427724 SUPT4H1P63272 117 aaKnown RBP8.94□□□□□ -0.98
TCOF1-204ENST00000427724 HERPUD1Q15011 391 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 NSUN5P1Q3KNT7 163 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 GALNT14Q96FL9 552 aa8.94□□□□□ -0.98
TCOF1-204ENST00000427724 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.94□□□□□ -0.98
TCOF1-204ENST00000427724 IDI2-AS1Q9NZ38 188 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms