RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 DVL1O14640 695 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 MGST3O14880 152 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 GFRA3O60609 400 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 ATP5G3P48201 142 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 JOSD1Q15040 202 aaPredicted RBP11.79□□□□□ -0.52
LIG1-202ENST00000427526 P2RY6Q15077 328 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 RPL39P5Q59GN2 51 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 PRAMEF5Q5TYX0 476 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 CLEC2AQ6UVW9 174 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 C16orf54Q6UWD8 224 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 OR4A16Q8NH70 328 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 ACY3Q96HD9 319 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 IFI27L2Q9H2X8 130 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 KCNIP2Q9NS61 270 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 DUSP13Q9UII6 198 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 XKRY2A2RUG3 117 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 MKRN2OSH3BPM6 223 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 M0R1X1 148 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 CRYAAP02489 173 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 CD99P14209 185 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 C1orf229Q6ZS94 237 aaPredicted RBP11.79□□□□□ -0.52
LIG1-202ENST00000427526 GCSAMQ8N6F7 178 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 FAM169BQ8N8A8 192 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 ACACAQ13085 2346 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 CEP295Q9C0D2 2601 aa11.79□□□□□ -0.52
LIG1-202ENST00000427526 TRAV3A0A0B4J244 114 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 EREGO14944 169 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 CRYABP02511 175 aaKnown RBP11.78□□□□□ -0.52
LIG1-202ENST00000427526 LRP11Q86VZ4 500 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 CISD2Q8N5K1 135 aaKnown RBP11.78□□□□□ -0.52
LIG1-202ENST00000427526 DDB2Q92466 427 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 C1orf159Q96HA4 380 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 MGST2Q99735 147 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 PATZ1Q9HBE1 687 aaKnown RBP11.78□□□□□ -0.52
LIG1-202ENST00000427526 HCFC1P51610 2035 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 PIEZO2Q9H5I5 2752 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 A0A1W2PPV4 95 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 UBE2G2P60604 165 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 DERL1Q9BUN8 251 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 MS4A5Q9H3V2 200 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 SLC25A15Q9Y619 301 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 NDUFB4O95168 129 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 CGB3P0DN86 165 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 CGB7P0DN87 165 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 GZMBP10144 247 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 LCN2P80188 198 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 SPRNQ5BIV9 151 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 C1orf185Q5T7R7 199 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 SPACA3Q8IXA5 215 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 ABHD12Q8N2K0 398 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 ZNRF1Q8ND25 227 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 GGTLC1Q9BX51 225 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 NCOR1P1Q9H4R4 102 aa11.78□□□□□ -0.52
LIG1-202ENST00000427526 HEYLQ9NQ87 328 aaPredicted RBP11.78□□□□□ -0.52
LIG1-202ENST00000427526 STAG3L2P0CL84 134 aa11.77□□□□□ -0.52
LIG1-202ENST00000427526 STAG3L3P0CL85 134 aa11.77□□□□□ -0.52
LIG1-202ENST00000427526 CHRNA7P36544 502 aa11.77□□□□□ -0.52
LIG1-202ENST00000427526 UTF1Q5T230 341 aa11.77□□□□□ -0.52
LIG1-202ENST00000427526 CST9LP1Q5W188 147 aa11.77□□□□□ -0.52
LIG1-202ENST00000427526 FAM234AQ9H0X4 552 aa11.77□□□□□ -0.52
LIG1-202ENST00000427526 FUT9Q9Y231 359 aa11.77□□□□□ -0.52
LIG1-202ENST00000427526 IGHV3OR15-7A0A075B7D8 119 aa11.77□□□□□ -0.53
LIG1-202ENST00000427526 IGHV3-13P01766 116 aa11.77□□□□□ -0.53
LIG1-202ENST00000427526 IGHV3-7P01780 117 aa11.77□□□□□ -0.53
LIG1-202ENST00000427526 BMP5P22003 454 aa11.77□□□□□ -0.53
LIG1-202ENST00000427526 ZNF83P51522 516 aa11.77□□□□□ -0.53
LIG1-202ENST00000427526 TMEM144Q7Z5S9 345 aa11.77□□□□□ -0.53
LIG1-202ENST00000427526 OR5T1Q8NG75 326 aa11.77□□□□□ -0.53
LIG1-202ENST00000427526 TMEM37Q8WXS4 190 aa11.77□□□□□ -0.53
LIG1-202ENST00000427526 S1PR3Q99500 378 aa11.77□□□□□ -0.53
LIG1-202ENST00000427526 TMEM140Q9NV12 185 aa11.77□□□□□ -0.53
LIG1-202ENST00000427526 LSM4Q9Y4Z0 139 aaKnown RBP11.77□□□□□ -0.53
LIG1-202ENST00000427526 F6UZH7 168 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 LHBP01229 141 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 NPSP0C0P6 89 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 ERVK-16P61578 105 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 PRSS8Q16651 343 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 KCNIP4Q6PIL6 250 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 ZNF114Q8NC26 417 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 PPP1R35Q8TAP8 253 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 IMMP2LQ96T52 175 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 PXMP4Q9Y6I8 212 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 TET2Q6N021 2002 aaPredicted RBP11.76□□□□□ -0.53
LIG1-202ENST00000427526 TRBV20OR9-2A0A075B6H5 130 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 TRGV8A0A0C4DH27 118 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 ARL14EPLP0DKL9 152 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 TXNDC17Q9BRA2 123 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 AURKAIP1Q9NWT8 199 aaPredicted RBP11.76□□□□□ -0.53
LIG1-202ENST00000427526 DLEU1O43261 78 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 FOXL1Q12952 345 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 MIC13Q5XKP0 118 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 TCF19Q9Y242 345 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 SSUH2Q9Y2M2 353 aa11.76□□□□□ -0.53
LIG1-202ENST00000427526 ITGB1BP1O14713 200 aa11.75□□□□□ -0.53
LIG1-202ENST00000427526 C1QTNF9P0C862 333 aa11.75□□□□□ -0.53
LIG1-202ENST00000427526 IL3RAP26951 378 aa11.75□□□□□ -0.53
LIG1-202ENST00000427526 KIR2DS2P43631 304 aa11.75□□□□□ -0.53
LIG1-202ENST00000427526 RPL15P61313 204 aaKnown RBP11.75□□□□□ -0.53
LIG1-202ENST00000427526 MRPS11P82912 194 aaKnown RBP11.75□□□□□ -0.53
LIG1-202ENST00000427526 C17orf58Q2M2W7 97 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms