RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 PLGLAQ15195 96 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 POU2AF1Q16633 256 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 TRIM16LQ309B1 348 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 VMA21Q3ZAQ7 101 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 AWAT1Q58HT5 328 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 MZT2BQ6NZ67 158 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 Q6ZRM9 215 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 C19orf35Q6ZS72 473 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 SLC35E3Q7Z769 313 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 PPP1R27Q86WC6 154 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 SGPP2Q8IWX5 399 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 CENPSQ8N2Z9 138 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 TCTEX1D1Q8N7M0 179 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 TEX45Q8NA69 505 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 POC5Q8NA72 575 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 OR52B4Q8NGK2 314 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 OR4F5Q8NH21 305 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 TMEM167AQ8TBQ9 72 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 CD300LFQ8TDQ1 290 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 WIPF2Q8TF74 440 aaPredicted RBP4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 CASTOR1Q8WTX7 329 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 TMEM158Q8WZ71 300 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 SCGB3A2Q96PL1 93 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 OR2A7Q96R45 310 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 SEC22CQ9BRL7 303 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 FAM103A1Q9BTL3 118 aaKnown RBP4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 C20orf85Q9H1P6 137 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 OR51J1Q9H342 316 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 RANBP3Q9H6Z4 567 aaPredicted RBP4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 PARP11Q9NR21 331 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 TMEM140Q9NV12 185 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 NUDT15Q9NV35 164 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 COMMD9Q9P000 198 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 KIAA1456Q9P272 454 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 WSB1Q9Y6I7 421 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 COL6A5A8TX70 2615 aa4.49□□□□□ -1.69
HERPUD2-204ENST00000426180 A0A0B4J293 547 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 C9orf170A2RU37 121 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 HMX3A6NHT5 357 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 CGB1A6NKQ9 187 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 TEX22C9J3V5 150 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 CDS2O95674 445 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 OPN1MWP04001 364 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 OR4E1P0C645 316 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 APELAP0DMC3 54 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 OPN1MW2P0DN77 364 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 OPN1MW3P0DN78 364 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 OR2B8PP59922 312 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 UBE2MP61081 183 aaKnown RBP4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 CFHR3Q02985 330 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 DHRS2Q13268 280 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 FXYD3Q14802 87 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 TNXAQ16473 311 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 TMEM128Q5BJH2 165 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 C19orf54Q5BKX5 351 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 TCTEX1D4Q5JR98 221 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 ASPHD1Q5U4P2 390 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 TMEM268Q5VZI3 342 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 C11orf87Q6NUJ2 197 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 ZNF562Q6V9R5 426 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 LYZL2Q7Z4W2 148 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 ZNF329Q86UD4 541 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 STPG2Q8N412 459 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 KLHDC1Q8N7A1 406 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 SLC35G3Q8N808 338 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 C11orf44Q8N8P7 122 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 DUSP18Q8NEJ0 188 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 DMBX1Q8NFW5 382 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 OR2T6Q8NHC8 308 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 GRPEL2Q8TAA5 225 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 ENKURQ8TC29 256 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 GPR146Q96CH1 333 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 GALNT14Q96FL9 552 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 TMEM56Q96MV1 263 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 QTRT1Q9BXR0 403 aaKnown RBP4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 FAM212BQ9NTI7 297 aaPredicted RBP4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 BET1LQ9NYM9 111 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 MMP24Q9Y5R2 645 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 NUBP2Q9Y5Y2 271 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 TMEM56-RWDD3S4R434 201 aa4.48□□□□□ -1.69
HERPUD2-204ENST00000426180 TRAV41A0A0B4J266 112 aa4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 TEX50A0A1B0GTY4 177 aa4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 MSGN1A6NI15 193 aa4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 SOX15O60248 233 aa4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 ADAP1O75689 374 aa4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 B3GALNT1O75752 331 aa4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 CNIH1O95406 144 aa4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 HLA-AP01891 365 aaKnown RBP4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 IGF1P05019 195 aa4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 CD28P10747 220 aa4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 AREGP15514 252 aa4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 HLA-GP17693 338 aa4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 COMPP49747 757 aaPredicted RBP4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 MECP2P51608 486 aaKnown RBP4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 CRIP2P52943 208 aaPredicted RBP4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 DEFA1P59665 94 aa4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 DEFA3P59666 94 aa4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 ERVK-16P61578 105 aa4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 RPL8P62917 257 aaKnown RBP4.47□□□□□ -1.69
HERPUD2-204ENST00000426180 SRSF3P84103 164 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms