RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 OR10J1P30954 320 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 VDAC2P45880 294 aaPredicted RBP6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 NUTF2P61970 127 aaKnown RBP6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 SLC35B1P78383 322 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 ZNF124Q15973 351 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 TDRG1Q3Y452 100 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 FAM201AQ5SY85 155 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 PRR7Q8TB68 274 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 RAB1CQ92928 201 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 SAMD10Q9BYL1 202 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 ENY2Q9NPA8 101 aa6.23□□□□□ -1.41
SMARCC1-202ENST00000425518 CGAP01215 116 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 RELBQ01201 579 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 STPG3Q8N7X2 389 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 WDR31Q8NA23 367 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 OR1L6Q8NGR2 347 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 HSPB9Q9BQS6 159 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 FAM103A1Q9BTL3 118 aaKnown RBP6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 MRPL18Q9H0U6 180 aaKnown RBP6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 GCM1Q9NP62 436 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 FOSL1P15407 271 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 CASP6P55212 293 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 RAB4BP61018 213 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 HTD2P86397 168 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 EFNB3Q15768 340 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 BATFQ16520 125 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 C1orf194Q5T5A4 169 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 CYB5R2Q6BCY4 276 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 DEFB108BQ8NET1 73 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 UHRF2Q96PU4 802 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 PARD6AQ9NPB6 346 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 TNCP24821 2201 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 TNRC6BQ9UPQ9 1833 aaKnown RBP6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 IGKV1D-17A0A075B6S4 117 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 A8MXE2 369 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 SERF1AO75920 110 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 IGFBP2P18065 325 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 GATA2P23769 480 aaPredicted RBP6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 RHOBP62745 196 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 RAB31Q13636 194 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 ARSJQ5FYB0 599 aaPredicted RBP6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 TEPPQ6URK8 271 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 VN1R17PQ8TDU5 208 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 LRFN3Q9BTN0 628 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 PAM16Q9Y3D7 125 aa6.22□□□□□ -1.41
SMARCC1-202ENST00000425518 GVINP1Q7Z2Y8 2422 aa6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 SNURFLB1AK76 121 aa6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 F2Z2F3 143 aa6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 K7EN84 100 aa6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 NPY1RP25929 384 aa6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 KIR2DL2P43627 348 aaPredicted RBP6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 TCL1AP56279 114 aa6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 PSG5Q15238 335 aa6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 KIAA1644Q3SXP7 199 aa6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 KRTCAP3Q53RY4 240 aa6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 C1orf229Q6ZS94 237 aaPredicted RBP6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 MIR17HGQ75NE6 70 aa6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 OR8I2Q8N0Y5 310 aa6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 C9orf106Q8NAJ2 232 aa6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 FAM216AQ8WUB2 273 aa6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 ZCCHC14Q8WYQ9 949 aaKnown RBP6.21□□□□□ -1.41
SMARCC1-202ENST00000425518 SPRY3O43610 288 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 CA2P00918 260 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 IGKV3-15P01624 115 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 CRYBB3P26998 211 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 TPPP2P59282 170 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 SPRNQ5BIV9 151 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 HES3Q5TGS1 186 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 Q6ZWC4 215 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 MOB3BQ86TA1 216 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 MOGAT3Q86VF5 341 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 LYG1Q8N1E2 194 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 SLC24A4Q8NFF2 622 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 PPP1R35Q8TAP8 253 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 TMEM106BQ9NUM4 274 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 IL36BQ9NZH7 164 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 ZNF891A8MT65 544 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 MT-CO2P00403 227 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 ZNF25P17030 456 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 FXYD3Q14802 87 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 DBX2Q6ZNG2 339 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 DOLPP1Q86YN1 238 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 MMD2Q8IY49 270 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 C1orf159Q96HA4 380 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 OPN3Q9H1Y3 402 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 JPT1Q9UK76 154 aa6.21□□□□□ -1.42
SMARCC1-202ENST00000425518 IGHV2OR16-5A0A0B4J2B6 119 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 MGST3O14880 152 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 NKX2-8O15522 239 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 OR7C2O60412 319 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 GNG10P50151 68 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 TNFSF10P50591 281 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 ZNF83P51522 516 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 YPEL3P61236 119 aaPredicted RBP6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 TMEM249Q2WGJ8 235 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 TRAT1Q6PIZ9 186 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 TXNDC17Q9BRA2 123 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 IFI27L2Q9H2X8 130 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 SERTAD4Q9NUC0 356 aa6.2□□□□□ -1.42
SMARCC1-202ENST00000425518 CALYQ9NYX4 217 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms