RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 RPEL1Q2QD12 228 aa16.81■□□□□ 0.28
TRAF4-204ENST00000422344 PHLDA2Q53GA4 152 aa16.81■□□□□ 0.28
TRAF4-204ENST00000422344 DGCR14Q96DF8 476 aaKnown RBP16.81■□□□□ 0.28
TRAF4-204ENST00000422344 RSRP1Q9BUV0 290 aa16.81■□□□□ 0.28
TRAF4-204ENST00000422344 TRBV9A0A0B4J1U6 114 aa16.8■□□□□ 0.28
TRAF4-204ENST00000422344 RBMXL2O75526 392 aaKnown RBP16.8■□□□□ 0.28
TRAF4-204ENST00000422344 OR2J3O76001 311 aa16.8■□□□□ 0.28
TRAF4-204ENST00000422344 TPPPO94811 219 aa16.8■□□□□ 0.28
TRAF4-204ENST00000422344 RPA2P15927 270 aa16.8■□□□□ 0.28
TRAF4-204ENST00000422344 LPAR6P43657 344 aa16.8■□□□□ 0.28
TRAF4-204ENST00000422344 E7EUB6 86 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 M0QYG6 137 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 TRBV12-3P01733 135 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 DEFA4P12838 97 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 MYOD1P15172 320 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 AREGP15514 252 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 PSMB6P28072 239 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 TMBIM6P55061 237 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 SYNJ2BPP57105 145 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 C15orf32Q32M92 178 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 RNASE10Q5GAN6 216 aaKnown RBP16.79■□□□□ 0.28
TRAF4-204ENST00000422344 FAM209BQ5JX69 171 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 SLC38A6Q8IZM9 456 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 OR52I2Q8NH67 350 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 FCAMRQ8WWV6 532 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 BCL7BQ9BQE9 202 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 KLK11Q9UBX7 282 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 FBXL7Q9UJT9 491 aa16.79■□□□□ 0.28
TRAF4-204ENST00000422344 MARCH11A6NNE9 402 aa16.78■□□□□ 0.28
TRAF4-204ENST00000422344 RPL5P46777 297 aaKnown RBP16.78■□□□□ 0.28
TRAF4-204ENST00000422344 OR2B8PP59922 312 aa16.78■□□□□ 0.28
TRAF4-204ENST00000422344 KLF5Q13887 457 aaPredicted RBP16.78■□□□□ 0.28
TRAF4-204ENST00000422344 OR9G4Q8NGQ1 327 aa16.78■□□□□ 0.28
TRAF4-204ENST00000422344 TRAV3A0A0B4J244 114 aa16.77■□□□□ 0.28
TRAF4-204ENST00000422344 A0A1B0GW64 132 aa16.77■□□□□ 0.28
TRAF4-204ENST00000422344 KRASP01116 189 aa16.77■□□□□ 0.28
TRAF4-204ENST00000422344 REG1AP05451 166 aa16.77■□□□□ 0.28
TRAF4-204ENST00000422344 CRYGCP07315 174 aa16.77■□□□□ 0.28
TRAF4-204ENST00000422344 FGF2P09038 288 aa16.77■□□□□ 0.28
TRAF4-204ENST00000422344 SPNP16150 400 aa16.77■□□□□ 0.28
TRAF4-204ENST00000422344 HIST1H1BP16401 226 aaKnown RBP16.77■□□□□ 0.28
TRAF4-204ENST00000422344 UCP3P55916 312 aa16.77■□□□□ 0.28
TRAF4-204ENST00000422344 C19orf35Q6ZS72 473 aa16.77■□□□□ 0.28
TRAF4-204ENST00000422344 LAX1Q8IWV1 398 aa16.77■□□□□ 0.28
TRAF4-204ENST00000422344 ABHD1Q96SE0 405 aa16.77■□□□□ 0.28
TRAF4-204ENST00000422344 MIXL1Q9H2W2 232 aa16.77■□□□□ 0.28
TRAF4-204ENST00000422344 CCDC59Q9P031 241 aaKnown RBP16.77■□□□□ 0.28
TRAF4-204ENST00000422344 MTFP1Q9UDX5 166 aa16.77■□□□□ 0.28
TRAF4-204ENST00000422344 LSM4Q9Y4Z0 139 aaKnown RBP16.77■□□□□ 0.28
TRAF4-204ENST00000422344 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.76■□□□□ 0.27
TRAF4-204ENST00000422344 SNAPC5O75971 98 aa16.76■□□□□ 0.27
TRAF4-204ENST00000422344 PGAM2P15259 253 aa16.76■□□□□ 0.27
TRAF4-204ENST00000422344 TBPP20226 339 aa16.76■□□□□ 0.27
TRAF4-204ENST00000422344 THOC7Q6I9Y2 204 aaKnown RBP16.76■□□□□ 0.27
TRAF4-204ENST00000422344 TBC1D26Q86UD7 250 aa16.76■□□□□ 0.27
TRAF4-204ENST00000422344 SRSF8Q9BRL6 282 aaKnown RBP16.76■□□□□ 0.27
TRAF4-204ENST00000422344 QTRT1Q9BXR0 403 aaKnown RBP16.76■□□□□ 0.27
TRAF4-204ENST00000422344 CTDSP2O14595 271 aa16.75■□□□□ 0.27
TRAF4-204ENST00000422344 CD3DP04234 171 aa16.75■□□□□ 0.27
TRAF4-204ENST00000422344 GP9P14770 177 aa16.75■□□□□ 0.27
TRAF4-204ENST00000422344 CTRB1P17538 263 aa16.75■□□□□ 0.27
TRAF4-204ENST00000422344 G6PCP35575 357 aa16.75■□□□□ 0.27
TRAF4-204ENST00000422344 MRPS10P82664 201 aaKnown RBP16.75■□□□□ 0.27
TRAF4-204ENST00000422344 CTRB2Q6GPI1 263 aa16.75■□□□□ 0.27
TRAF4-204ENST00000422344 ARRDC1Q8N5I2 433 aa16.75■□□□□ 0.27
TRAF4-204ENST00000422344 PEMTQ9UBM1 199 aa16.75■□□□□ 0.27
TRAF4-204ENST00000422344 CGB1A6NKQ9 187 aa16.74■□□□□ 0.27
TRAF4-204ENST00000422344 GABARAPH6UMI1 98 aa16.74■□□□□ 0.27
TRAF4-204ENST00000422344 BMPR1BO00238 502 aa16.74■□□□□ 0.27
TRAF4-204ENST00000422344 CYB5BO43169 146 aa16.74■□□□□ 0.27
TRAF4-204ENST00000422344 TRAPPC2P0DI81 140 aa16.74■□□□□ 0.27
TRAF4-204ENST00000422344 TRAPPC2BP0DI82 140 aa16.74■□□□□ 0.27
TRAF4-204ENST00000422344 TAS2R19P59542 299 aa16.74■□□□□ 0.27
TRAF4-204ENST00000422344 ZNF585BQ52M93 769 aa16.74■□□□□ 0.27
TRAF4-204ENST00000422344 HAPLN4Q86UW8 402 aa16.74■□□□□ 0.27
TRAF4-204ENST00000422344 DYNC2LI1Q8TCX1 351 aa16.74■□□□□ 0.27
TRAF4-204ENST00000422344 EEF1AKMT3Q96AZ1 226 aa16.74■□□□□ 0.27
TRAF4-204ENST00000422344 FAM212BQ9NTI7 297 aaPredicted RBP16.74■□□□□ 0.27
TRAF4-204ENST00000422344 SMAD5-AS1Q9Y6J3 95 aa16.74■□□□□ 0.27
TRAF4-204ENST00000422344 IGLC7A0M8Q6 106 aa16.73■□□□□ 0.27
TRAF4-204ENST00000422344 NDUFB8O95169 186 aa16.73■□□□□ 0.27
TRAF4-204ENST00000422344 IGLV1-51P01701 117 aa16.73■□□□□ 0.27
TRAF4-204ENST00000422344 HSD17B13Q7Z5P4 300 aaPredicted RBP16.73■□□□□ 0.27
TRAF4-204ENST00000422344 TMEM229BQ8NBD8 167 aa16.73■□□□□ 0.27
TRAF4-204ENST00000422344 OR1L8Q8NGR8 309 aa16.73■□□□□ 0.27
TRAF4-204ENST00000422344 DIRAS2Q96HU8 199 aa16.73■□□□□ 0.27
TRAF4-204ENST00000422344 FANCD2OSQ96PS1 177 aa16.73■□□□□ 0.27
TRAF4-204ENST00000422344 TSC22D3Q99576 134 aa16.73■□□□□ 0.27
TRAF4-204ENST00000422344 HINT2Q9BX68 163 aa16.73■□□□□ 0.27
TRAF4-204ENST00000422344 C6orf62Q9GZU0 229 aaPredicted RBP16.73■□□□□ 0.27
TRAF4-204ENST00000422344 TEX50A0A1B0GTY4 177 aa16.72■□□□□ 0.27
TRAF4-204ENST00000422344 GGCTO75223 188 aaKnown RBP16.72■□□□□ 0.27
TRAF4-204ENST00000422344 RAB3DO95716 219 aa16.72■□□□□ 0.27
TRAF4-204ENST00000422344 IGHV3-23P01764 117 aa16.72■□□□□ 0.27
TRAF4-204ENST00000422344 SSBP1Q04837 148 aaKnown RBP16.72■□□□□ 0.27
TRAF4-204ENST00000422344 IL18Q14116 193 aa16.72■□□□□ 0.27
TRAF4-204ENST00000422344 CADM3Q8N126 398 aa16.72■□□□□ 0.27
TRAF4-204ENST00000422344 ZNF486Q96H40 463 aaPredicted RBP16.72■□□□□ 0.27
TRAF4-204ENST00000422344 FKBP11Q9NYL4 201 aa16.72■□□□□ 0.27
TRAF4-204ENST00000422344 THYN1Q9P016 225 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms