RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 OR4A47Q6IF82 309 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 ARL6IP6Q8N6S5 226 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 LRFN3Q9BTN0 628 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 PRDM13Q9H4Q3 707 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 ENY2Q9NPA8 101 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 APC2O95996 2303 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 IGHV3-48P01763 117 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 TNFAIP6P98066 277 aaPredicted RBP11.34□□□□□ -0.59
CTCFL-203ENST00000422109 DEFA6Q01524 100 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 C17orf58Q2M2W7 97 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 FAM90A1Q86YD7 464 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 OR1P1Q8NH06 330 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 FAM216AQ8WUB2 273 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 PITPNC1Q9UKF7 332 aa11.34□□□□□ -0.59
CTCFL-203ENST00000422109 RBFOX2O43251 390 aaKnown RBP eCLIP11.33□□□□□ -0.6
CTCFL-203ENST00000422109 SPINK4O60575 86 aa11.33□□□□□ -0.6
CTCFL-203ENST00000422109 YPEL1O60688 119 aa11.33□□□□□ -0.6
CTCFL-203ENST00000422109 CA2P00918 260 aa11.33□□□□□ -0.6
CTCFL-203ENST00000422109 AMBPP02760 352 aa11.33□□□□□ -0.6
CTCFL-203ENST00000422109 IGFBP2P18065 325 aa11.33□□□□□ -0.6
CTCFL-203ENST00000422109 VDAC2P45880 294 aaPredicted RBP11.33□□□□□ -0.6
CTCFL-203ENST00000422109 ARSJQ5FYB0 599 aaPredicted RBP11.33□□□□□ -0.6
CTCFL-203ENST00000422109 ASPHD1Q5U4P2 390 aa11.33□□□□□ -0.6
CTCFL-203ENST00000422109 LINC01551Q86U37 167 aa11.33□□□□□ -0.6
CTCFL-203ENST00000422109 OR4P4Q8NGL7 312 aa11.33□□□□□ -0.6
CTCFL-203ENST00000422109 YPEL2Q96QA6 119 aa11.33□□□□□ -0.6
CTCFL-203ENST00000422109 TMPRSS2O15393 492 aa11.33□□□□□ -0.6
CTCFL-203ENST00000422109 PMS2P11Q13670 270 aa11.33□□□□□ -0.6
CTCFL-203ENST00000422109 YTHDF2Q9Y5A9 579 aaKnown RBP11.33□□□□□ -0.6
CTCFL-203ENST00000422109 FAM215AQ9Y5M1 114 aa11.33□□□□□ -0.6
CTCFL-203ENST00000422109 TRBV20OR9-2A0A075B6H5 130 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 F6UZH7 168 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 SLC17A3O00476 420 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 IGKV1-16P04430 117 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 IL6RP08887 468 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-203ENST00000422109 NPY1RP25929 384 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 ZNF124Q15973 351 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 VWC2Q2TAL6 325 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 SGMS2Q8NHU3 365 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 IL3RAP26951 378 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 BPIFB3P59826 476 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 RPP30P78346 268 aaKnown RBP11.32□□□□□ -0.6
CTCFL-203ENST00000422109 PRB3Q04118 309 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-203ENST00000422109 MZT1Q08AG7 82 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 TMEM183AQ8IXX5 376 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 STPG3Q8N7X2 389 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 SLC24A4Q8NFF2 622 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 OR4S2Q8NH73 311 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 GCM1Q9NP62 436 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 TP53TG5Q9Y2B4 290 aa11.32□□□□□ -0.6
CTCFL-203ENST00000422109 TRGV10A0A0A0MS01 117 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 ZNF891A8MT65 544 aaPredicted RBP11.31□□□□□ -0.6
CTCFL-203ENST00000422109 HIST1H1BP16401 226 aaKnown RBP11.31□□□□□ -0.6
CTCFL-203ENST00000422109 TRAT1Q6PIZ9 186 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 WFDC8Q8IUA0 241 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 TCTEX1D1Q8N7M0 179 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 PRSS47A8MTI9 375 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 NUBP1P53384 320 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 MRPL41Q8IXM3 137 aaKnown RBP11.31□□□□□ -0.6
CTCFL-203ENST00000422109 IMMP2LQ96T52 175 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 MDFIC2A0A1B0GVS7 189 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 GRIFINA4D1Z8 144 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 OR10J4P0C629 311 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 CD33P20138 364 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 KCNIP4Q6PIL6 250 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 PIP4P1Q86T03 277 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 OR10W1Q8NGF6 305 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 OCC1Q8TAD7 63 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 C1orf159Q96HA4 380 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 RNF7Q9UBF6 113 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 OR51B2Q9Y5P1 312 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 TRAPPC1Q9Y5R8 145 aa11.31□□□□□ -0.6
CTCFL-203ENST00000422109 SPTA1P02549 2419 aa11.3□□□□□ -0.6
CTCFL-203ENST00000422109 ZNF729A6NN14 1252 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-203ENST00000422109 IGHV1-46P01743 117 aa11.3□□□□□ -0.6
CTCFL-203ENST00000422109 GLRXP35754 106 aa11.3□□□□□ -0.6
CTCFL-203ENST00000422109 OR5I1Q13606 314 aa11.3□□□□□ -0.6
CTCFL-203ENST00000422109 IGFL2Q6UWQ7 119 aa11.3□□□□□ -0.6
CTCFL-203ENST00000422109 MIR17HGQ75NE6 70 aa11.3□□□□□ -0.6
CTCFL-203ENST00000422109 ANAPC16Q96DE5 110 aa11.3□□□□□ -0.6
CTCFL-203ENST00000422109 NPVFQ9HCQ7 196 aa11.3□□□□□ -0.6
CTCFL-203ENST00000422109 DYSFO75923 2080 aa11.3□□□□□ -0.6
CTCFL-203ENST00000422109 KBTBD11-OT1A0A1B0GTJ5 212 aa11.3□□□□□ -0.6
CTCFL-203ENST00000422109 SRRM4A7MD48 611 aaKnown RBP11.3□□□□□ -0.6
CTCFL-203ENST00000422109 CCL3L1P16619 93 aa11.3□□□□□ -0.6
CTCFL-203ENST00000422109 GPX4P36969 197 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-203ENST00000422109 EFNB3Q15768 340 aa11.3□□□□□ -0.6
CTCFL-203ENST00000422109 NAV3Q8IVL0 2385 aa11.3□□□□□ -0.6
CTCFL-203ENST00000422109 C15orf61A6NNL5 157 aa11.29□□□□□ -0.6
CTCFL-203ENST00000422109 J3QR06 171 aa11.29□□□□□ -0.6
CTCFL-203ENST00000422109 F2RL2O00254 374 aa11.29□□□□□ -0.6
CTCFL-203ENST00000422109 OPRK1P41145 380 aa11.29□□□□□ -0.6
CTCFL-203ENST00000422109 SELENOVP59797 346 aa11.29□□□□□ -0.6
CTCFL-203ENST00000422109 RPL31P62899 125 aaKnown RBP11.29□□□□□ -0.6
CTCFL-203ENST00000422109 SLC35B1P78383 322 aa11.29□□□□□ -0.6
CTCFL-203ENST00000422109 HLA-DRB5Q30154 266 aa11.29□□□□□ -0.6
CTCFL-203ENST00000422109 TIMM23BQ5SRD1 257 aa11.29□□□□□ -0.6
CTCFL-203ENST00000422109 TEPPQ6URK8 271 aa11.29□□□□□ -0.6
CTCFL-203ENST00000422109 TMEM256Q8N2U0 113 aa11.29□□□□□ -0.6
CTCFL-203ENST00000422109 H1FXQ92522 213 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms