RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 A0A1W2PS18 150 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 SNURFLB1AK76 121 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 AIPO00170 330 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 NDUFAB1O14561 156 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 TSC22D2O75157 780 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 RBBP9O75884 186 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 CCNB2O95067 398 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 IGKV1D-12P01611 117 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 ATF1P18846 271 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 CCL1P22362 96 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 MAGEA2P43356 314 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 CXCR4P61073 352 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 PAX5Q02548 391 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 ATP5G2Q06055 141 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 EXOSC2Q13868 293 aaKnown RBP3.49□□□□□ -1.85
SFXN1-202ENST00000421887 CDK5R1Q15078 307 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 FAM106AQ4KMX7 169 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 CT45A1Q5HYN5 189 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 LIPKQ5VXJ0 399 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 GLYATQ6IB77 296 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 ZNF322Q6U7Q0 402 aaPredicted RBP3.49□□□□□ -1.85
SFXN1-202ENST00000421887 FAM131AQ6UXB0 335 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 PLEKHG7Q6ZR37 379 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 Q6ZR54 194 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 Q6ZSR3 168 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 ERASQ7Z444 233 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 SPATA12Q7Z6I5 190 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 SAXO1Q8IYX7 474 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 FAM89BQ8N5H3 189 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 AQP11Q8NBQ7 271 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 OR5B3Q8NH48 314 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 CT45A3Q8NHU0 189 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 PLPPR1Q8TBJ4 325 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 GIPC3Q8TF64 312 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 DYDC1Q8WWB3 177 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 PINX1Q96BK5 328 aaKnown RBP3.49□□□□□ -1.85
SFXN1-202ENST00000421887 MRPL20Q9BYC9 149 aaKnown RBP3.49□□□□□ -1.85
SFXN1-202ENST00000421887 PARP12Q9H0J9 701 aaKnown RBP3.49□□□□□ -1.85
SFXN1-202ENST00000421887 RNF167Q9H6Y7 350 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 GORASP2Q9H8Y8 452 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 OR2S2Q9NQN1 319 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 CMTM6Q9NX76 183 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 ELF5Q9UKW6 265 aaPredicted RBP3.49□□□□□ -1.85
SFXN1-202ENST00000421887 TRAPPC2LQ9UL33 140 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 VPS13DQ5THJ4 4388 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 A0A0G2JND7 137 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 OR5H14A6NHG9 310 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 FAM223BA6NKX1 122 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 C15orf65H3BRN8 121 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 TNFRSF11BO00300 401 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 GGCTO75223 188 aaKnown RBP3.48□□□□□ -1.85
SFXN1-202ENST00000421887 SRSF10O75494 262 aaKnown RBP3.48□□□□□ -1.85
SFXN1-202ENST00000421887 OR7C1O76099 320 aaPredicted RBP3.48□□□□□ -1.85
SFXN1-202ENST00000421887 HMGN1P05114 100 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 PRSS1P07477 247 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 GSTT2P0CG29 244 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 GSTT2BP0CG30 244 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 RPA2P15927 270 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 NPY1RP25929 384 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 TMEM187Q14656 261 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 RSU1Q15404 277 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 TNFAIP8L3Q5GJ75 292 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 ATAD3CQ5T2N8 411 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 C6orf183Q5T699 404 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 LAMTOR1Q6IAA8 161 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 ASCL4Q6XD76 172 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 FAM223AQ8IWN6 122 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 SUMF2Q8NBJ7 301 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 ZNF439Q8NDP4 499 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 KCNG3Q8TAE7 436 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 CACNG8Q8WXS5 425 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 CPNE2Q96FN4 548 aaPredicted RBP3.48□□□□□ -1.85
SFXN1-202ENST00000421887 PYURFQ96I23 114 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 ST6GAL2Q96JF0 529 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 CNN2Q99439 309 aaKnown RBP3.48□□□□□ -1.85
SFXN1-202ENST00000421887 TSNAXQ99598 290 aaKnown RBP3.48□□□□□ -1.85
SFXN1-202ENST00000421887 RNF5Q99942 180 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 APOL4Q9BPW4 351 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 NICN1Q9BSH3 213 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 S100A14Q9HCY8 104 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 SMPD3Q9NY59 655 aaPredicted RBP3.48□□□□□ -1.85
SFXN1-202ENST00000421887 MLXQ9UH92 298 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 EXOSC1Q9Y3B2 195 aaKnown RBP3.48□□□□□ -1.85
SFXN1-202ENST00000421887 WASHC3Q9Y3C0 194 aa3.48□□□□□ -1.85
SFXN1-202ENST00000421887 RPL36Q9Y3U8 105 aaKnown RBP3.48□□□□□ -1.85
SFXN1-202ENST00000421887 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.47□□□□□ -1.85
SFXN1-202ENST00000421887 IGKV1-9A0A0C4DH69 117 aa3.47□□□□□ -1.85
SFXN1-202ENST00000421887 LOC107986453A0A1B0GWG9 222 aa3.47□□□□□ -1.85
SFXN1-202ENST00000421887 OR4C46A6NHA9 309 aa3.47□□□□□ -1.85
SFXN1-202ENST00000421887 PPP5D1E7EU14 171 aa3.47□□□□□ -1.85
SFXN1-202ENST00000421887 ZNF670-ZNF695F2Z2N8 137 aa3.47□□□□□ -1.85
SFXN1-202ENST00000421887 K7EQM0 130 aa3.47□□□□□ -1.85
SFXN1-202ENST00000421887 NME4O00746 187 aa3.47□□□□□ -1.85
SFXN1-202ENST00000421887 MAGEB4O15481 346 aaPredicted RBP3.47□□□□□ -1.85
SFXN1-202ENST00000421887 SULT1B1O43704 296 aa3.47□□□□□ -1.85
SFXN1-202ENST00000421887 FADS2O95864 444 aaKnown RBP3.47□□□□□ -1.85
SFXN1-202ENST00000421887 CA1P00915 261 aaPredicted RBP3.47□□□□□ -1.85
SFXN1-202ENST00000421887 HLA-AP01891 365 aaKnown RBP3.47□□□□□ -1.85
SFXN1-202ENST00000421887 UBCP0CG48 685 aaKnown RBP3.47□□□□□ -1.85
SFXN1-202ENST00000421887 SAA2P0DJI9 122 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms