RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 RAB32Q13637 225 aa17.15■□□□□ 0.34
ABCF3-202ENST00000421340 PLGLAQ15195 96 aa17.15■□□□□ 0.34
ABCF3-202ENST00000421340 COMMD5Q9GZQ3 224 aa17.15■□□□□ 0.34
ABCF3-202ENST00000421340 TEX50A0A1B0GTY4 177 aa17.14■□□□□ 0.33
ABCF3-202ENST00000421340 IGHV4-59P01825 116 aa17.14■□□□□ 0.33
ABCF3-202ENST00000421340 OR2B8PP59922 312 aa17.14■□□□□ 0.33
ABCF3-202ENST00000421340 SIGLECL1Q8N7X8 197 aa17.14■□□□□ 0.33
ABCF3-202ENST00000421340 OR1L8Q8NGR8 309 aa17.14■□□□□ 0.33
ABCF3-202ENST00000421340 RASL11BQ9BPW5 248 aa17.14■□□□□ 0.33
ABCF3-202ENST00000421340 TPSG1Q9NRR2 321 aa17.14■□□□□ 0.33
ABCF3-202ENST00000421340 ACANP16112 2415 aa17.13■□□□□ 0.33
ABCF3-202ENST00000421340 K7EPK0 472 aa17.13■□□□□ 0.33
ABCF3-202ENST00000421340 SYNGR2O43760 224 aa17.13■□□□□ 0.33
ABCF3-202ENST00000421340 HLA-DRB1P01911 266 aa17.13■□□□□ 0.33
ABCF3-202ENST00000421340 SLC25A4P12235 298 aa17.13■□□□□ 0.33
ABCF3-202ENST00000421340 LYL1P12980 280 aa17.13■□□□□ 0.33
ABCF3-202ENST00000421340 SRD5A1P18405 259 aa17.13■□□□□ 0.33
ABCF3-202ENST00000421340 PJVKQ0ZLH3 352 aa17.13■□□□□ 0.33
ABCF3-202ENST00000421340 PRSS54Q6PEW0 395 aa17.13■□□□□ 0.33
ABCF3-202ENST00000421340 ZNF562Q6V9R5 426 aa17.13■□□□□ 0.33
ABCF3-202ENST00000421340 RBMS3Q6XE24 437 aaKnown RBP17.13■□□□□ 0.33
ABCF3-202ENST00000421340 C5orf56Q8N8D9 126 aa17.13■□□□□ 0.33
ABCF3-202ENST00000421340 GSX1Q9H4S2 264 aaPredicted RBP17.13■□□□□ 0.33
ABCF3-202ENST00000421340 NDUFA4L2Q9NRX3 87 aa17.13■□□□□ 0.33
ABCF3-202ENST00000421340 VPREB3Q9UKI3 123 aa17.13■□□□□ 0.33
ABCF3-202ENST00000421340 TRAV14DV4A0A0A6YYC5 116 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 INS-IGF2F8WCM5 200 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 G3V3Q6 166 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 FCN1O00602 326 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 DEDDO75618 318 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 ACTL6BO94805 426 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 SCGB1D2O95969 90 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 IFNA17P01571 189 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 C1QBP02746 253 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 COMPP49747 757 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-202ENST00000421340 CD300CQ08708 224 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 LY6EQ16553 131 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 Q5BKY6 102 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 C11orf87Q6NUJ2 197 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 THAP6Q8TBB0 222 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 RAB40CQ96S21 281 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 RNF126Q9BV68 326 aa17.12■□□□□ 0.33
ABCF3-202ENST00000421340 WRBO00258 174 aa17.11■□□□□ 0.33
ABCF3-202ENST00000421340 HOXA3O43365 443 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-202ENST00000421340 CHST1O43916 411 aa17.11■□□□□ 0.33
ABCF3-202ENST00000421340 PVALBP20472 110 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-202ENST00000421340 TAS2R30P59541 319 aa17.11■□□□□ 0.33
ABCF3-202ENST00000421340 S100A10P60903 97 aa17.11■□□□□ 0.33
ABCF3-202ENST00000421340 POLR2GP62487 172 aaKnown RBP eCLIP17.11■□□□□ 0.33
ABCF3-202ENST00000421340 PRCDQ00LT1 54 aa17.11■□□□□ 0.33
ABCF3-202ENST00000421340 LRRC37A5PQ49AS3 106 aa17.11■□□□□ 0.33
ABCF3-202ENST00000421340 TMEM65Q6PI78 240 aa17.11■□□□□ 0.33
ABCF3-202ENST00000421340 TMEM219Q86XT9 240 aa17.11■□□□□ 0.33
ABCF3-202ENST00000421340 CIB3Q96Q77 187 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-202ENST00000421340 SRSF8Q9BRL6 282 aaKnown RBP17.11■□□□□ 0.33
ABCF3-202ENST00000421340 RBKSQ9H477 322 aa17.11■□□□□ 0.33
ABCF3-202ENST00000421340 C11orf1Q9H5F2 150 aa17.11■□□□□ 0.33
ABCF3-202ENST00000421340 RCL1Q9Y2P8 373 aaKnown RBP17.11■□□□□ 0.33
ABCF3-202ENST00000421340 LSM5Q9Y4Y9 91 aaKnown RBP17.11■□□□□ 0.33
ABCF3-202ENST00000421340 SETXQ7Z333 2677 aaKnown RBP17.11■□□□□ 0.33
ABCF3-202ENST00000421340 E5RGE8 158 aa17.1■□□□□ 0.33
ABCF3-202ENST00000421340 H0YIZ8 118 aa17.1■□□□□ 0.33
ABCF3-202ENST00000421340 CA2P00918 260 aa17.1■□□□□ 0.33
ABCF3-202ENST00000421340 TNXAQ16473 311 aa17.1■□□□□ 0.33
ABCF3-202ENST00000421340 SMIM8Q96KF7 97 aa17.1■□□□□ 0.33
ABCF3-202ENST00000421340 CLCC1Q96S66 551 aa17.1■□□□□ 0.33
ABCF3-202ENST00000421340 MAGT1Q9H0U3 335 aa17.1■□□□□ 0.33
ABCF3-202ENST00000421340 A0A1W2PN81 502 aa17.09■□□□□ 0.33
ABCF3-202ENST00000421340 CLDN34H7C241 214 aa17.09■□□□□ 0.33
ABCF3-202ENST00000421340 AMY1AP04745 511 aa17.09■□□□□ 0.33
ABCF3-202ENST00000421340 CHRNA7P36544 502 aa17.09■□□□□ 0.33
ABCF3-202ENST00000421340 RPL27AP46776 148 aaKnown RBP17.09■□□□□ 0.33
ABCF3-202ENST00000421340 CX3CL1P78423 397 aa17.09■□□□□ 0.33
ABCF3-202ENST00000421340 SSBP2P81877 361 aaPredicted RBP17.09■□□□□ 0.33
ABCF3-202ENST00000421340 HSD17B13Q7Z5P4 300 aaPredicted RBP17.09■□□□□ 0.33
ABCF3-202ENST00000421340 MRPL41Q8IXM3 137 aaKnown RBP17.09■□□□□ 0.33
ABCF3-202ENST00000421340 DTD1Q8TEA8 209 aa17.09■□□□□ 0.33
ABCF3-202ENST00000421340 HYLS1Q96M11 299 aa17.09■□□□□ 0.33
ABCF3-202ENST00000421340 WSB1Q9Y6I7 421 aa17.09■□□□□ 0.33
ABCF3-202ENST00000421340 NAV3Q8IVL0 2385 aa17.08■□□□□ 0.33
ABCF3-202ENST00000421340 HMSDA8MTL9 139 aa17.08■□□□□ 0.32
ABCF3-202ENST00000421340 CEBPZOSA8MTT3 80 aa17.08■□□□□ 0.32
ABCF3-202ENST00000421340 SMLR1H3BR10 107 aa17.08■□□□□ 0.32
ABCF3-202ENST00000421340 GPR137BO60478 399 aa17.08■□□□□ 0.32
ABCF3-202ENST00000421340 CNIH1O95406 144 aa17.08■□□□□ 0.32
ABCF3-202ENST00000421340 VDAC2P45880 294 aaPredicted RBP17.08■□□□□ 0.32
ABCF3-202ENST00000421340 FXYD3Q14802 87 aa17.08■□□□□ 0.32
ABCF3-202ENST00000421340 ZFP69Q49AA0 526 aa17.08■□□□□ 0.32
ABCF3-202ENST00000421340 HIPK2Q9H2X6 1198 aa17.08■□□□□ 0.32
ABCF3-202ENST00000421340 SVEP1Q4LDE5 3571 aa17.08■□□□□ 0.32
ABCF3-202ENST00000421340 IGHV7-81A0A0B4J1V7 117 aa17.07■□□□□ 0.32
ABCF3-202ENST00000421340 CGB1A6NKQ9 187 aa17.07■□□□□ 0.32
ABCF3-202ENST00000421340 INAFM1C9JVW0 142 aa17.07■□□□□ 0.32
ABCF3-202ENST00000421340 L7N2F9 121 aa17.07■□□□□ 0.32
ABCF3-202ENST00000421340 SSSCA1O60232 199 aa17.07■□□□□ 0.32
ABCF3-202ENST00000421340 NXPH3O95157 252 aa17.07■□□□□ 0.32
ABCF3-202ENST00000421340 MYOD1P15172 320 aa17.07■□□□□ 0.32
ABCF3-202ENST00000421340 P2RY1P47900 373 aa17.07■□□□□ 0.32
ABCF3-202ENST00000421340 PAX9P55771 341 aa17.07■□□□□ 0.32
ABCF3-202ENST00000421340 ATP5IP56385 69 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms