RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 TPPPO94811 219 aa16.18■□□□□ 0.18
PTPN4-202ENST00000420482 TNFAIP8O95379 198 aa16.18■□□□□ 0.18
PTPN4-202ENST00000420482 FGF2P09038 288 aa16.18■□□□□ 0.18
PTPN4-202ENST00000420482 AREGP15514 252 aa16.18■□□□□ 0.18
PTPN4-202ENST00000420482 MECP2P51608 486 aaKnown RBP16.18■□□□□ 0.18
PTPN4-202ENST00000420482 TAS2R46P59540 309 aa16.18■□□□□ 0.18
PTPN4-202ENST00000420482 CD81P60033 236 aa16.18■□□□□ 0.18
PTPN4-202ENST00000420482 POU2AF1Q16633 256 aa16.18■□□□□ 0.18
PTPN4-202ENST00000420482 THOC7Q6I9Y2 204 aaKnown RBP16.18■□□□□ 0.18
PTPN4-202ENST00000420482 ZNF818PQ6ZRF7 136 aa16.18■□□□□ 0.18
PTPN4-202ENST00000420482 GPHB5Q86YW7 130 aa16.18■□□□□ 0.18
PTPN4-202ENST00000420482 SAMD12Q8N8I0 201 aa16.18■□□□□ 0.18
PTPN4-202ENST00000420482 OR51H1Q8NH63 302 aa16.18■□□□□ 0.18
PTPN4-202ENST00000420482 THAP7Q9BT49 309 aaPredicted RBP16.18■□□□□ 0.18
PTPN4-202ENST00000420482 E7EUB6 86 aa16.17■□□□□ 0.18
PTPN4-202ENST00000420482 OR2C1O95371 312 aa16.17■□□□□ 0.18
PTPN4-202ENST00000420482 CD300EQ496F6 205 aaPredicted RBP16.17■□□□□ 0.18
PTPN4-202ENST00000420482 CLEC19AQ6UXS0 136 aa16.17■□□□□ 0.18
PTPN4-202ENST00000420482 CMTM1Q8IZ96 169 aa16.17■□□□□ 0.18
PTPN4-202ENST00000420482 TSPAN14Q8NG11 270 aa16.17■□□□□ 0.18
PTPN4-202ENST00000420482 FANCD2OSQ96PS1 177 aa16.17■□□□□ 0.18
PTPN4-202ENST00000420482 COMMD9Q9P000 198 aa16.17■□□□□ 0.18
PTPN4-202ENST00000420482 RYR2Q92736 4967 aa16.16■□□□□ 0.18
PTPN4-202ENST00000420482 IZUMO1RA6ND01 250 aa16.16■□□□□ 0.18
PTPN4-202ENST00000420482 C2orf70A6NJV1 201 aa16.16■□□□□ 0.18
PTPN4-202ENST00000420482 NDUFB8O95169 186 aa16.16■□□□□ 0.18
PTPN4-202ENST00000420482 FOLR2P14207 255 aa16.16■□□□□ 0.18
PTPN4-202ENST00000420482 S100GP29377 79 aa16.16■□□□□ 0.18
PTPN4-202ENST00000420482 RPS19P39019 145 aaKnown RBP16.16■□□□□ 0.18
PTPN4-202ENST00000420482 KLK9Q2XQG4 91 aa16.16■□□□□ 0.18
PTPN4-202ENST00000420482 DHRS11Q6UWP2 260 aa16.16■□□□□ 0.18
PTPN4-202ENST00000420482 HSD17B13Q7Z5P4 300 aaPredicted RBP16.16■□□□□ 0.18
PTPN4-202ENST00000420482 OR5H2Q8NGV7 314 aa16.16■□□□□ 0.18
PTPN4-202ENST00000420482 NEURL2Q9BR09 285 aa16.16■□□□□ 0.18
PTPN4-202ENST00000420482 KLK9Q9UKQ9 250 aa16.16■□□□□ 0.18
PTPN4-202ENST00000420482 SMIM31A0A1B0GVY4 71 aa16.15■□□□□ 0.18
PTPN4-202ENST00000420482 ZNF320A2RRD8 509 aa16.15■□□□□ 0.18
PTPN4-202ENST00000420482 UPK2O00526 184 aa16.15■□□□□ 0.18
PTPN4-202ENST00000420482 HLA-AP01891 365 aaKnown RBP16.15■□□□□ 0.18
PTPN4-202ENST00000420482 PRSS3P35030 304 aa16.15■□□□□ 0.18
PTPN4-202ENST00000420482 TAS2R20P59543 309 aa16.15■□□□□ 0.18
PTPN4-202ENST00000420482 OR2B8PP59922 312 aa16.15■□□□□ 0.18
PTPN4-202ENST00000420482 GUCA2BQ16661 112 aa16.15■□□□□ 0.18
PTPN4-202ENST00000420482 HAGHQ16775 308 aa16.15■□□□□ 0.18
PTPN4-202ENST00000420482 DEFB114Q30KQ6 69 aa16.15■□□□□ 0.18
PTPN4-202ENST00000420482 ZNF2Q9BSG1 426 aaPredicted RBP16.15■□□□□ 0.18
PTPN4-202ENST00000420482 QTRT1Q9BXR0 403 aaKnown RBP16.15■□□□□ 0.18
PTPN4-202ENST00000420482 TMEM140Q9NV12 185 aa16.15■□□□□ 0.18
PTPN4-202ENST00000420482 IGLV11-55A0A075B6I3 123 aa16.14■□□□□ 0.17
PTPN4-202ENST00000420482 A0A1B0GW64 132 aa16.14■□□□□ 0.17
PTPN4-202ENST00000420482 IGHV3-23P01764 117 aa16.14■□□□□ 0.17
PTPN4-202ENST00000420482 REG1AP05451 166 aa16.14■□□□□ 0.17
PTPN4-202ENST00000420482 F2RP25116 425 aa16.14■□□□□ 0.17
PTPN4-202ENST00000420482 GNRHRP30968 328 aa16.14■□□□□ 0.17
PTPN4-202ENST00000420482 RFX2P48378 723 aa16.14■□□□□ 0.17
PTPN4-202ENST00000420482 LSM3P62310 102 aaKnown RBP16.14■□□□□ 0.17
PTPN4-202ENST00000420482 C19orf35Q6ZS72 473 aa16.14■□□□□ 0.17
PTPN4-202ENST00000420482 OR6F1Q8NGZ6 308 aa16.14■□□□□ 0.17
PTPN4-202ENST00000420482 MOB3AQ96BX8 217 aa16.14■□□□□ 0.17
PTPN4-202ENST00000420482 YIPF6Q96EC8 236 aa16.14■□□□□ 0.17
PTPN4-202ENST00000420482 CCDC140Q96MF4 163 aa16.14■□□□□ 0.17
PTPN4-202ENST00000420482 DMRT1Q9Y5R6 373 aa16.14■□□□□ 0.17
PTPN4-202ENST00000420482 TENM2Q9NT68 2774 aa16.14■□□□□ 0.17
PTPN4-202ENST00000420482 S1PR2O95136 353 aa16.13■□□□□ 0.17
PTPN4-202ENST00000420482 PMP2P02689 132 aa16.13■□□□□ 0.17
PTPN4-202ENST00000420482 RLN1P04808 185 aa16.13■□□□□ 0.17
PTPN4-202ENST00000420482 TGFBR1P36897 503 aa16.13■□□□□ 0.17
PTPN4-202ENST00000420482 SLC16A13Q7RTY0 426 aa16.13■□□□□ 0.17
PTPN4-202ENST00000420482 SLC25A46Q96AG3 418 aa16.13■□□□□ 0.17
PTPN4-202ENST00000420482 PLEKHA3Q9HB20 300 aa16.13■□□□□ 0.17
PTPN4-202ENST00000420482 ZC4H2Q9NQZ6 224 aa16.13■□□□□ 0.17
PTPN4-202ENST00000420482 CEPT1Q9Y6K0 416 aa16.13■□□□□ 0.17
PTPN4-202ENST00000420482 S4R3C0 116 aa16.13■□□□□ 0.17
PTPN4-202ENST00000420482 MARCH11A6NNE9 402 aa16.12■□□□□ 0.17
PTPN4-202ENST00000420482 A8MWP6 167 aa16.12■□□□□ 0.17
PTPN4-202ENST00000420482 CLEC3BP05452 202 aa16.12■□□□□ 0.17
PTPN4-202ENST00000420482 TRAPPC2P0DI81 140 aa16.12■□□□□ 0.17
PTPN4-202ENST00000420482 TRAPPC2BP0DI82 140 aa16.12■□□□□ 0.17
PTPN4-202ENST00000420482 MYOD1P15172 320 aa16.12■□□□□ 0.17
PTPN4-202ENST00000420482 CBLN1P23435 193 aa16.12■□□□□ 0.17
PTPN4-202ENST00000420482 LPCAT3Q6P1A2 487 aa16.12■□□□□ 0.17
PTPN4-202ENST00000420482 ADAMTSL5Q6ZMM2 481 aa16.12■□□□□ 0.17
PTPN4-202ENST00000420482 CMTM3Q96MX0 182 aa16.12■□□□□ 0.17
PTPN4-202ENST00000420482 ANAPC10Q9UM13 185 aa16.12■□□□□ 0.17
PTPN4-202ENST00000420482 SACSQ9NZJ4 4579 aa16.12■□□□□ 0.17
PTPN4-202ENST00000420482 IGLC7A0M8Q6 106 aa16.11■□□□□ 0.17
PTPN4-202ENST00000420482 ZNF785A8K8V0 405 aa16.11■□□□□ 0.17
PTPN4-202ENST00000420482 PGLYRP1O75594 196 aaPredicted RBP16.11■□□□□ 0.17
PTPN4-202ENST00000420482 SNAPC5O75971 98 aa16.11■□□□□ 0.17
PTPN4-202ENST00000420482 NAT1P18440 290 aa16.11■□□□□ 0.17
PTPN4-202ENST00000420482 TSPAN5P62079 268 aa16.11■□□□□ 0.17
PTPN4-202ENST00000420482 ANKRD55Q3KP44 614 aa16.11■□□□□ 0.17
PTPN4-202ENST00000420482 ZNF57Q68EA5 555 aaPredicted RBP16.11■□□□□ 0.17
PTPN4-202ENST00000420482 OR1L8Q8NGR8 309 aa16.11■□□□□ 0.17
PTPN4-202ENST00000420482 MARC2Q969Z3 335 aa16.11■□□□□ 0.17
PTPN4-202ENST00000420482 DGCR14Q96DF8 476 aaKnown RBP16.11■□□□□ 0.17
PTPN4-202ENST00000420482 TRAV3A0A0B4J244 114 aa16.1■□□□□ 0.17
PTPN4-202ENST00000420482 MFSD2BA6NFX1 497 aa16.1■□□□□ 0.17
PTPN4-202ENST00000420482 CGB1A6NKQ9 187 aa16.1■□□□□ 0.17
PTPN4-202ENST00000420482 OR11H12B2RN74 326 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms