RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 A0A096LNT2 108 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 IGHV3-72A0A0B4J1Y9 119 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 IGHV1-69DA0A0B4J2H0 117 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 A0A1W2PN81 502 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 A0A1W2PRD5 423 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 A0A1W2PRF3 423 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 A0A1W2PRM7 423 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 IGSF23A1L1A6 192 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 UPK2O00526 184 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 NBR2O15453 112 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 DFFBO76075 338 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 VENTXO95231 258 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 IGKV1D-33P01593 117 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 IGKV1-33P01594 117 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 IGHV1-69P01742 117 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 OR8U8P0C7N1 319 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 HKR1P10072 659 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 CD1BP29016 333 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 BRS3P32247 399 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 CHRNA7P36544 502 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 SULT1A1P50225 295 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 F2RL1P55085 397 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 BRWD1-AS2P59051 145 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 LINC00205P59089 165 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 PRCDQ00LT1 54 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 ID3Q02535 119 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 PAX8Q06710 450 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 DIAPH2-AS1Q14236 149 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 HES1Q14469 280 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 HABP2Q14520 560 aaPredicted RBP4.81□□□□□ -1.64
HMGB3-202ENST00000419110 SSX2Q16385 188 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 EIF5AL1Q6IS14 154 aaKnown RBP4.81□□□□□ -1.64
HMGB3-202ENST00000419110 HCP5Q6MZN7 132 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 PUSL1Q8N0Z8 303 aaKnown RBP4.81□□□□□ -1.64
HMGB3-202ENST00000419110 STPG2Q8N412 459 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 TEX29Q8N6K0 151 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 OR1S2Q8NGQ3 325 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 OR2T10Q8NGZ9 312 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 STOML3Q8TAV4 291 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 TMEM167AQ8TBQ9 72 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 ST8SIA2Q92186 375 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 C1orf159Q96HA4 380 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 RNF5Q99942 180 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 RNF126Q9BV68 326 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 HINT2Q9BX68 163 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 REG4Q9BYZ8 158 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 SMIM3Q9BZL3 60 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 HIPK2Q9H2X6 1198 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 C11orf1Q9H5F2 150 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 HEYLQ9NQ87 328 aaPredicted RBP4.81□□□□□ -1.64
HMGB3-202ENST00000419110 TMEM14BQ9NUH8 114 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 HIF1ANQ9NWT6 349 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 PSENENQ9NZ42 101 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 ZNF257Q9Y2Q1 563 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 HILPDAQ9Y5L2 63 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 OR51B2Q9Y5P1 312 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 TACC2O95359 2948 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 APCP25054 2843 aa4.81□□□□□ -1.64
HMGB3-202ENST00000419110 ITPR3Q14573 2671 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 FASNP49327 2511 aaKnown RBP4.8□□□□□ -1.64
HMGB3-202ENST00000419110 KRTAP9-6A0A140TA67 174 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 UBE2L5PA0A1B0GUS4 154 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 LY6LH3BQJ8 138 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 PLXNB1O43157 2135 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 CHST1O43916 411 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 JTBO76095 146 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 MOSP00540 346 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 SNRNP70P08621 437 aaKnown RBP4.8□□□□□ -1.64
HMGB3-202ENST00000419110 FBP1P09467 338 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 TMEM11P17152 192 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 NPY1RP25929 384 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 MAS1LP35410 378 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 RPL27AP46776 148 aaKnown RBP4.8□□□□□ -1.64
HMGB3-202ENST00000419110 RAB14P61106 215 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 HSPE1P61604 102 aaKnown RBP4.8□□□□□ -1.64
HMGB3-202ENST00000419110 RAB11AP62491 216 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 SLC38A11Q08AI6 406 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 EXOSC2Q13868 293 aaKnown RBP4.8□□□□□ -1.64
HMGB3-202ENST00000419110 CLINT1Q14677 625 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 TMEM249Q2WGJ8 235 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 PDLIM3Q53GG5 364 aaPredicted RBP4.8□□□□□ -1.64
HMGB3-202ENST00000419110 SPINK9Q5DT21 86 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 SPANXN5Q5MJ07 72 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 HIST2H2BCQ6DN03 193 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 Q6ZRM9 215 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 LHFPL4Q7Z7J7 247 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 TMEM252Q8N6L7 170 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 TEX45Q8NA69 505 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 SLC24A4Q8NFF2 622 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 OR1L8Q8NGR8 309 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 WFDC12Q8WWY7 111 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 CFHR4Q92496 578 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 PINX1Q96BK5 328 aaKnown RBP4.8□□□□□ -1.64
HMGB3-202ENST00000419110 MALSU1Q96EH3 234 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 PHYHIPLQ96FC7 376 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 SMIM8Q96KF7 97 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 ATP5SQ99766 215 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 C7orf69Q9H7B7 122 aa4.8□□□□□ -1.64
HMGB3-202ENST00000419110 ZNF430Q9H8G1 570 aaPredicted RBP4.8□□□□□ -1.64
HMGB3-202ENST00000419110 KCNIP2Q9NS61 270 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms