RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SHHQ15465 462 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 TMEM241Q24JQ0 296 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 C15orf32Q32M92 178 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 BSXQ3C1V8 233 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 TMEM41BQ5BJD5 291 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.06□□□□□ -2.08
VPS41-206ENST00000418457 C10orf128Q5T292 105 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 C1orf194Q5T5A4 169 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 NCR3LG1Q68D85 454 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 SLC25A24Q6NUK1 477 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 ASCL4Q6XD76 172 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 CYP2G1PQ6ZSU1 146 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 LANCL3Q6ZV70 420 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 C6orf201Q7Z4U5 140 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 LYZL2Q7Z4W2 148 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 LINC00596Q86U02 117 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 ZNF573Q86YE8 665 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 TGIF2LXQ8IUE1 241 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 KIR2DL5AQ8N109 375 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 OSR2Q8N2R0 312 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 GPR137CQ8N3F9 429 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 FGFRL1Q8N441 504 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 TMEM252Q8N6L7 170 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 SLC35G3Q8N808 338 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 ZFP62Q8NB50 900 aaPredicted RBP2.06□□□□□ -2.08
VPS41-206ENST00000418457 ZNRF1Q8ND25 227 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 OR56B2PQ8NGI1 322 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 OR52M1Q8NGK5 317 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 OR5D13Q8NGL4 314 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 OR5C1Q8NGR4 320 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 OR4A16Q8NH70 328 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 CCL4L1Q8NHW4 92 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 SCGB1C1Q8TD33 95 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 SLC37A2Q8TED4 501 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 RNF138Q8WVD3 245 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 SPTSSAQ969W0 71 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 BORCS8Q96FH0 119 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 OXGR1Q96P68 337 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 RARRES2Q99969 163 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 TXNDC17Q9BRA2 123 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 PARP12Q9H0J9 701 aaKnown RBP2.06□□□□□ -2.08
VPS41-206ENST00000418457 TMEM222Q9H0R3 208 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 MAGT1Q9H0U3 335 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 SH3BGRL3Q9H299 93 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 OR51B6Q9H340 312 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 OR51I2Q9H344 312 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 CALHM2Q9HA72 323 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 ELL3Q9HB65 397 aaPredicted RBP2.06□□□□□ -2.08
VPS41-206ENST00000418457 ZNF160Q9HCG1 818 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 FAM60AQ9NP50 221 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 MANBALQ9NQG1 85 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 PNO1Q9NRX1 252 aaKnown RBP2.06□□□□□ -2.08
VPS41-206ENST00000418457 GLRX2Q9NS18 164 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 SOHLH2Q9NX45 425 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 IL19Q9UHD0 177 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 MCTS1Q9ULC4 181 aaKnown RBP2.06□□□□□ -2.08
VPS41-206ENST00000418457 LHFPL6Q9Y693 200 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 URGCP-MRPS24S4R325 110 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 RALGAPA1Q6GYQ0 2036 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 ABCA7Q8IZY2 2146 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 THADAQ6YHU6 1953 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 CACNA1CQ13936 2221 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 TRBV6-6A0A0A6YYG2 114 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 IGKV1D-43A0A0B4J1Z2 117 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 IGKV1-9A0A0C4DH69 117 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 SPTY2D1-AS1A0A0U1RR47 76 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 CTXND1A0A1B0GTU2 59 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 MAP1LC3B2A6NCE7 125 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 FAM24AA6NFZ4 105 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 ZNF705GA8MUZ8 300 aaPredicted RBP2.05□□□□□ -2.08
VPS41-206ENST00000418457 C10orf142B7Z368 130 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 NPIPA2E9PIF3 369 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 F6UZH7 168 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 M0R135 149 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 TP53I11O14683 189 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 DLEU1O43261 78 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 TRAF3IP2O43734 574 aaPredicted RBP2.05□□□□□ -2.08
VPS41-206ENST00000418457 PDE6DO43924 150 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 SSSCA1O60232 199 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 SMPD2O60906 423 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 MMP23AO75900 390 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 KBTBD11O94819 623 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 PPYP01298 95 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 IGLV3-19P01714 112 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 OPN1LWP04000 364 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 SERPINA7P05543 415 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 PGA5P0DJD9 388 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 COX5BP10606 129 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 GP9P14770 177 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 ZNF17P17021 662 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 TCN2P20062 427 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 KLK2P20151 261 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 BCL3P20749 454 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 FUT3P21217 361 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 MDH2P40926 338 aaKnown RBP2.05□□□□□ -2.08
VPS41-206ENST00000418457 GALR1P47211 349 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 PSMB3P49720 205 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 DYNLT3P51808 116 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 TDGF1P3P51864 188 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 CNN1P51911 297 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms