RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 TNFRSF14Q92956 283 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 SARAFQ96BY9 339 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 SRXN1Q9BYN0 137 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 PRDM6Q9NQX0 595 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 TRAV8-6A0A0B4J262 113 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 A0A0J9YW62 118 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 HELTA6NFD8 242 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 CRXO43186 299 aaPredicted RBP6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 NEURL1O76050 574 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 USF1P22415 310 aaPredicted RBP6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 EIF4EBP1Q13541 118 aaPredicted RBP6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 KLF5Q13887 457 aaPredicted RBP6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 CEACAM16Q2WEN9 425 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 PQLC2Q6ZP29 291 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 WIPF2Q8TF74 440 aaPredicted RBP6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 TMEM45BQ96B21 275 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 TMEM70Q9BUB7 260 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 FGF21Q9NSA1 209 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 PEF1Q9UBV8 284 aaKnown RBP6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 IZUMO1RA6ND01 250 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 OR4C46A6NHA9 309 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 RBMXL2O75526 392 aaKnown RBP6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 BRWD1-AS2P59051 145 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 CFHR1Q03591 330 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 SLC25A34Q6PIV7 304 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 RASL11AQ6T310 242 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 ZNF497Q6ZNH5 498 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 H2BFWTQ7Z2G1 175 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 C1RLQ9NZP8 487 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 TRAPPC2LQ9UL33 140 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 MRPS21P82921 87 aaKnown RBP6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 ARF1P84077 181 aaKnown RBP6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 KIR3DL3Q8N743 410 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 OR4S2Q8NH73 311 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 COMMD5Q9GZQ3 224 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 SAP30LQ9HAJ7 183 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 GP6Q9HCN6 339 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 TNFRSF19Q9NS68 423 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 ARL2-SNX15V9GYD0 113 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 G3V4G9 280 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 TNFSF15O95150 251 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 HLA-DRB1P01911 266 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 TMPRSS3P57727 454 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 CATR1Q13166 79 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 EFNB3Q15768 340 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 TIGITQ495A1 244 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 Q6P435 159 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 MRPL21Q7Z2W9 205 aaKnown RBP6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 FER1L6-AS1Q8NA97 138 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 SLC25A40Q8TBP6 338 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 C5orf30Q96GV9 206 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 ZNF331Q9NQX6 463 aaPredicted RBP6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 MBNL3Q9NUK0 354 aaKnown RBP6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 CABIN1Q9Y6J0 2220 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 A0A1W2PPC4 97 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 C17orf98A8MV24 154 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 C3orf80F5H4A9 247 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 ZIC3O60481 467 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 GATA2P23769 480 aaPredicted RBP6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 CRYBB3P26998 211 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 REG1BP48304 166 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 PAX2Q02962 417 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 DEFB133Q30KQ1 61 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 IBA57Q5T440 356 aaKnown RBP6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 PET117Q6UWS5 81 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 AAED1Q7RTV5 226 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 MS4A5Q9H3V2 200 aa6.66□□□□□ -1.34
HMGXB4-202ENST00000418170 IGHV1OR21-1A0A087WYE8 117 aa6.65□□□□□ -1.34
HMGXB4-202ENST00000418170 CGAP01215 116 aa6.65□□□□□ -1.34
HMGXB4-202ENST00000418170 SPATA31B1PQ5VZV4 182 aa6.65□□□□□ -1.34
HMGXB4-202ENST00000418170 RNASEKQ6P5S7 137 aaKnown RBP6.65□□□□□ -1.34
HMGXB4-202ENST00000418170 PLXDC1Q8IUK5 500 aa6.65□□□□□ -1.34
HMGXB4-202ENST00000418170 OR2Y1Q8NGV0 311 aa6.65□□□□□ -1.34
HMGXB4-202ENST00000418170 KCNIP1Q9NZI2 227 aa6.65□□□□□ -1.34
HMGXB4-202ENST00000418170 ZNF716A6NP11 495 aa6.65□□□□□ -1.34
HMGXB4-202ENST00000418170 PRSS46E5RG02 174 aa6.65□□□□□ -1.34
HMGXB4-202ENST00000418170 DNPH1O43598 174 aa6.65□□□□□ -1.34
HMGXB4-202ENST00000418170 LIFP15018 202 aa6.65□□□□□ -1.34
HMGXB4-202ENST00000418170 DSCR4P56555 118 aaPredicted RBP6.65□□□□□ -1.34
HMGXB4-202ENST00000418170 RARRES3Q9UL19 164 aa6.65□□□□□ -1.34
HMGXB4-202ENST00000418170 hDV102S1A0JD36 115 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 G3V3Y1 287 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 FOXH1O75593 365 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 CA6P23280 308 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 RAC3P60763 192 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 FAM120AOSQ5T036 256 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 UFSP1Q6NVU6 142 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 CLEC5AQ9NY25 188 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 LSM4Q9Y4Z0 139 aaKnown RBP6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 DCHS1Q96JQ0 3298 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 OR7C2O60412 319 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 IGLV2-8P01709 118 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 RNFT1Q5M7Z0 435 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 ZNF808Q8N4W9 903 aaPredicted RBP6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 WDR31Q8NA23 367 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 SSMEM1Q8WWF3 244 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 DEFB126Q9BYW3 111 aa6.65□□□□□ -1.35
HMGXB4-202ENST00000418170 TMEM265A0A087WTH1 108 aa6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 HIST1H1AQ02539 215 aaPredicted RBP6.64□□□□□ -1.35
HMGXB4-202ENST00000418170 OR1B1Q8NGR6 318 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms