RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 IGLV3-12A0A075B6K2 115 aa12.27□□□□□ -0.44
NCKIPSD-204ENST00000416649 CA1P00915 261 aaPredicted RBP12.27□□□□□ -0.44
NCKIPSD-204ENST00000416649 HOXA4Q00056 320 aaPredicted RBP12.27□□□□□ -0.44
NCKIPSD-204ENST00000416649 WDR73Q6P4I2 378 aa12.27□□□□□ -0.44
NCKIPSD-204ENST00000416649 AAED1Q7RTV5 226 aa12.27□□□□□ -0.44
NCKIPSD-204ENST00000416649 MUC15Q8N387 334 aa12.27□□□□□ -0.44
NCKIPSD-204ENST00000416649 NEUROG1Q92886 237 aa12.27□□□□□ -0.44
NCKIPSD-204ENST00000416649 IL19Q9UHD0 177 aa12.27□□□□□ -0.44
NCKIPSD-204ENST00000416649 MGAQ8IWI9 3026 aa12.27□□□□□ -0.44
NCKIPSD-204ENST00000416649 MUC6Q6W4X9 2439 aa12.27□□□□□ -0.44
NCKIPSD-204ENST00000416649 TNXAQ16473 311 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 C1orf185Q5T7R7 199 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 PQLC2Q6ZP29 291 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 H2BFWTQ7Z2G1 175 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 SLC24A4Q8NFF2 622 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 TRAV9-1A0A075B6T8 112 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 A0A096LPE4 126 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 TRBV9A0A0B4J1U6 114 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 MUC21A0A0G2JKD1 596 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 MUC21A0A140T8X8 626 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 A0A1W2PPZ6 126 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 GAGE12BA1L429 117 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 SAP30O75446 220 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 CA7P43166 264 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 GNG4P50150 75 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 RPL30P62888 115 aaKnown RBP12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 MUC21Q5SSG8 566 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 SPATA31B1PQ5VZV4 182 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 YRDCQ86U90 279 aaKnown RBP12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 PNKDQ8N490 385 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 OR2Y1Q8NGV0 311 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 SEPSECSQ9HD40 501 aaKnown RBP12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 ZNF391Q9UJN7 358 aa12.27□□□□□ -0.45
NCKIPSD-204ENST00000416649 TAX1BP3O14907 124 aa12.26□□□□□ -0.45
NCKIPSD-204ENST00000416649 RAB29O14966 203 aa12.26□□□□□ -0.45
NCKIPSD-204ENST00000416649 TOX4O94842 621 aa12.26□□□□□ -0.45
NCKIPSD-204ENST00000416649 CXorf1O96002 111 aa12.26□□□□□ -0.45
NCKIPSD-204ENST00000416649 APCSP02743 223 aa12.26□□□□□ -0.45
NCKIPSD-204ENST00000416649 MT-ND6P03923 174 aa12.26□□□□□ -0.45
NCKIPSD-204ENST00000416649 CENPWQ5EE01 88 aa12.26□□□□□ -0.45
NCKIPSD-204ENST00000416649 DCAF12Q5T6F0 453 aa12.26□□□□□ -0.45
NCKIPSD-204ENST00000416649 EBLN2Q6P2I7 272 aa12.26□□□□□ -0.45
NCKIPSD-204ENST00000416649 GP6Q9HCN6 339 aa12.26□□□□□ -0.45
NCKIPSD-204ENST00000416649 GCM1Q9NP62 436 aa12.26□□□□□ -0.45
NCKIPSD-204ENST00000416649 CLEC5AQ9NY25 188 aa12.26□□□□□ -0.45
NCKIPSD-204ENST00000416649 LRRC10Q5BKY1 277 aa12.26□□□□□ -0.45
NCKIPSD-204ENST00000416649 COL5A1P20908 1838 aaPredicted RBP12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 C5orf49A4QMS7 147 aa12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 FOXH1O75593 365 aa12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 KLF7O75840 302 aaPredicted RBP12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 ACTL6BO94805 426 aa12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 USF1P22415 310 aaPredicted RBP12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 CX3CL1P78423 397 aa12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 MRPL14Q6P1L8 145 aaKnown RBP12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 NCOR1P1Q9H4R4 102 aa12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 LOXL2Q9Y4K0 774 aa12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 C17orf98A8MV24 154 aa12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 H0Y8G0 127 aa12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 NTN3O00634 580 aaPredicted RBP12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 RHBDL1O75783 438 aa12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 TRIP6Q15654 476 aaKnown RBP12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 DHRS13Q6UX07 377 aa12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 SSBP3Q9BWW4 388 aaPredicted RBP12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 WDR83OSQ9Y284 106 aa12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 POLEQ07864 2286 aa12.25□□□□□ -0.45
NCKIPSD-204ENST00000416649 IGLV3-32A0A0A0MS00 114 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 FAM181BA6NEQ2 426 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 CIDEAO60543 219 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 CELA3BP08861 270 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 STAG3L2P0CL84 134 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 STAG3L3P0CL85 134 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 CRYBB3P26998 211 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 GCHFRP30047 84 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 SLAQ13239 276 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 ZNF841Q6ZN19 808 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 KIR3DL3Q8N743 410 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 Q8N7P7 452 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 NHLRC2Q8NBF2 726 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 TNRC6BQ9UPQ9 1833 aaKnown RBP12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 SAA2-SAA4A0A096LPE2 208 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 hDV102S1A0JD36 115 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 HELTA6NFD8 242 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 GPR6P46095 362 aaPredicted RBP12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 UBE2G1P62253 170 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 SRYQ05066 204 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 IL11RAQ14626 422 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 CEACAM21Q3KPI0 293 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 OR52L2PQ8NGH6 319 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 OR4P4Q8NGL7 312 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 C18orf32Q8TCD1 76 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 ZNF430Q9H8G1 570 aaPredicted RBP12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 ZNF331Q9NQX6 463 aaPredicted RBP12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 TIMM8BQ9Y5J9 83 aaPredicted RBP12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 TPRP12270 2363 aaKnown RBP12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 M0R1X1 148 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 CGAP01215 116 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 AMY1AP04745 511 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 SRD5A2P31213 254 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 SSTR5P35346 364 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 SELENOVP59797 346 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms