RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 LY6G6EA0A0G2JKS1 128 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 NUP37Q8NFH4 326 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 OR4C13Q8NGP0 309 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 SGK494Q96LW2 274 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 U3KQA8 63 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 hCG_38984A0A1B0GV85 526 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 DSCR9P59020 149 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 WDR25Q64LD2 544 aaPredicted RBP13.18□□□□□ -0.3
PHRF1-203ENST00000416188 ZCCHC24Q8N2G6 241 aaKnown RBP13.18□□□□□ -0.3
PHRF1-203ENST00000416188 ZNF738Q8NE65 137 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 RTN4RQ9BZR6 473 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 IGHV3-35A0A0C4DH35 117 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 MST1P26927 711 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 CD81P60033 236 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 RELBQ01201 579 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 OR10J6PQ8NGY7 276 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 ARL14EPLP0DKL9 152 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 C8orf88P0DMB2 117 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 MAS1LP35410 378 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 EBLN2Q6P2I7 272 aa13.18□□□□□ -0.3
PHRF1-203ENST00000416188 MFAP4P55083 255 aa13.17□□□□□ -0.3
PHRF1-203ENST00000416188 UCP3P55916 312 aa13.17□□□□□ -0.3
PHRF1-203ENST00000416188 TICRRQ7Z2Z1 1910 aa13.17□□□□□ -0.3
PHRF1-203ENST00000416188 TANC1Q9C0D5 1861 aa13.17□□□□□ -0.3
PHRF1-203ENST00000416188 CIDEAO60543 219 aa13.17□□□□□ -0.3
PHRF1-203ENST00000416188 POC1AQ8NBT0 407 aa13.17□□□□□ -0.3
PHRF1-203ENST00000416188 HSPB9Q9BQS6 159 aa13.17□□□□□ -0.3
PHRF1-203ENST00000416188 LYNX1G3V0Z9 82 aa13.17□□□□□ -0.3
PHRF1-203ENST00000416188 LYNX1P0DP58 116 aa13.17□□□□□ -0.3
PHRF1-203ENST00000416188 FXYD3Q14802 87 aa13.17□□□□□ -0.3
PHRF1-203ENST00000416188 FAM216BQ8N7L0 139 aa13.17□□□□□ -0.3
PHRF1-203ENST00000416188 LSM10Q969L4 123 aaKnown RBP13.17□□□□□ -0.3
PHRF1-203ENST00000416188 TMEM56-RWDD3S4R434 201 aa13.17□□□□□ -0.3
PHRF1-203ENST00000416188 FAM209BQ5JX69 171 aa13.17□□□□□ -0.3
PHRF1-203ENST00000416188 ZNF385CQ66K41 422 aaPredicted RBP13.17□□□□□ -0.3
PHRF1-203ENST00000416188 NPIPB3Q92617 1050 aa13.17□□□□□ -0.3
PHRF1-203ENST00000416188 A0A0B4J293 547 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 CRYBB3P26998 211 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 PLSCR4Q9NRQ2 329 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 RPL39P5Q59GN2 51 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 LINC00518Q8N0U6 118 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 TMEM186Q96B77 213 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 A0A1W2PS18 150 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 MT-ND6P03923 174 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 ANK1P16157 1881 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 NMUP48645 174 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 OR51G1Q8NGK1 321 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 OR4C46A6NHA9 309 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 CD99P14209 185 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 BTF3P20290 206 aaKnown RBP13.16□□□□□ -0.3
PHRF1-203ENST00000416188 DNM1P46Q6ZS02 220 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 SMIM8Q96KF7 97 aa13.16□□□□□ -0.3
PHRF1-203ENST00000416188 IGKV3D-15A0A087WSY6 115 aa13.15□□□□□ -0.3
PHRF1-203ENST00000416188 IGKV3-15P01624 115 aa13.15□□□□□ -0.3
PHRF1-203ENST00000416188 CKS2P33552 79 aa13.15□□□□□ -0.3
PHRF1-203ENST00000416188 LAMTOR1Q6IAA8 161 aa13.15□□□□□ -0.3
PHRF1-203ENST00000416188 STPG3Q8N7X2 389 aa13.15□□□□□ -0.3
PHRF1-203ENST00000416188 ZNF502Q8TBZ5 544 aa13.15□□□□□ -0.3
PHRF1-203ENST00000416188 IGHV1-18A0A0C4DH31 117 aa13.15□□□□□ -0.3
PHRF1-203ENST00000416188 TMEM177Q53S58 311 aa13.15□□□□□ -0.3
PHRF1-203ENST00000416188 OR4B1Q8NGF8 309 aa13.15□□□□□ -0.3
PHRF1-203ENST00000416188 MED12Q93074 2177 aa13.15□□□□□ -0.3
PHRF1-203ENST00000416188 HEATR5BQ9P2D3 2071 aa13.15□□□□□ -0.3
PHRF1-203ENST00000416188 A0A0G2JK05 382 aa13.15□□□□□ -0.3
PHRF1-203ENST00000416188 M0R3E3 92 aa13.15□□□□□ -0.3
PHRF1-203ENST00000416188 ZNF25P17030 456 aaPredicted RBP13.15□□□□□ -0.3
PHRF1-203ENST00000416188 C12orf77C9JDV5 145 aa13.15□□□□□ -0.31
PHRF1-203ENST00000416188 DANCRP0C864 163 aa13.15□□□□□ -0.31
PHRF1-203ENST00000416188 PGLYRP4Q96LB8 373 aa13.15□□□□□ -0.31
PHRF1-203ENST00000416188 NABP2Q9BQ15 211 aa13.15□□□□□ -0.31
PHRF1-203ENST00000416188 OR51M1Q9H341 326 aa13.15□□□□□ -0.31
PHRF1-203ENST00000416188 PLA2G5P39877 138 aa13.14□□□□□ -0.31
PHRF1-203ENST00000416188 EFNA4P52798 201 aa13.14□□□□□ -0.31
PHRF1-203ENST00000416188 PKIAP61925 76 aa13.14□□□□□ -0.31
PHRF1-203ENST00000416188 C21orf62-AS1Q17RA5 79 aa13.14□□□□□ -0.31
PHRF1-203ENST00000416188 TGIF2-C20orf24A0A0A6YYL0 155 aa13.14□□□□□ -0.31
PHRF1-203ENST00000416188 MARVELD3Q96A59 401 aa13.14□□□□□ -0.31
PHRF1-203ENST00000416188 DPM3Q9P2X0 92 aa13.14□□□□□ -0.31
PHRF1-203ENST00000416188 NYNRINQ9P2P1 1898 aaKnown RBP13.14□□□□□ -0.31
PHRF1-203ENST00000416188 IGHV3OR16-12A0A075B7B8 117 aa13.14□□□□□ -0.31
PHRF1-203ENST00000416188 EGR1P18146 543 aa13.14□□□□□ -0.31
PHRF1-203ENST00000416188 PROB1E7EW31 1015 aa13.14□□□□□ -0.31
PHRF1-203ENST00000416188 ACP7Q6ZNF0 438 aa13.14□□□□□ -0.31
PHRF1-203ENST00000416188 ELOVL1Q9BW60 279 aa13.14□□□□□ -0.31
PHRF1-203ENST00000416188 ZP1P60852 638 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 A6NDN8 102 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 AGAP20933 346 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 COMPP49747 757 aaPredicted RBP13.13□□□□□ -0.31
PHRF1-203ENST00000416188 TMEM30BQ3MIR4 351 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 OR1N2Q8NGR9 330 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 SPSB4Q96A44 273 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 ZFP30Q9Y2G7 519 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 RRHO14718 337 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 HLA-DQA1P01909 254 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 KIAA1644Q3SXP7 199 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 FAM106AQ4KMX7 169 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 LINC00114Q6XXX2 140 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 DTX1Q86Y01 620 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 SRSF12Q8WXF0 261 aaKnown RBP13.13□□□□□ -0.31
PHRF1-203ENST00000416188 C1QTNF5Q9BXJ0 243 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms