RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 CASTOR1Q8WTX7 329 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 TMEM230Q96A57 120 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 TVP23CQ96ET8 276 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 IP6K3Q96PC2 410 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 TSPAN32Q96QS1 320 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 SPIN2AQ99865 258 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 SPIN2BQ9BPZ2 258 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 RTBDNQ9BSG5 229 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 TM2D1Q9BX74 207 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR11A1Q9GZK7 315 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 EIF5A2Q9GZV4 153 aaKnown RBP2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 SLC25A31Q9H0C2 315 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 PTGES2Q9H7Z7 377 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 WFDC1Q9HC57 220 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 GPR84Q9NQS5 396 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 TAS2R4Q9NYW5 299 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR5AC2Q9NZP5 309 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 THAP10Q9P2Z0 257 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 RARRES3Q9UL19 164 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 FBXO7Q9Y3I1 522 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 AGRNO00468 2067 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 HEATR5BQ9P2D3 2071 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 DOCK3Q8IZD9 2030 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 KIAA1549LQ6ZVL6 1849 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 PLXND1Q9Y4D7 1925 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 A0A0G2JN53 185 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 TINCRA0A1B0GVN0 87 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 LOC107986453A0A1B0GWG9 222 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 MEIS3P1A6NDR6 274 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 DHRS7CA6NNS2 312 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 H3BQ15 152 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 C15orf65H3BRN8 121 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 HSD17B6O14756 317 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST1H2BKO60814 126 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 NPIPB7O75200 414 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 MPDU1O75352 247 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 PITX3O75364 302 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 NUDT14O95848 222 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 BGLAPP02818 100 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 TYMSP04818 313 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 APODP05090 189 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST1H2BJP06899 126 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 CST2P09228 141 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 PGA3P0DJD8 388 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 LIPCP11150 499 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 SLC25A6P12236 298 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF823P16415 610 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST1H2BOP23527 126 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 GDF1P27539 372 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 PEBP1P30086 187 aaKnown RBP2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST1H2BBP33778 126 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF93P35789 620 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 ARR3P36575 388 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 NDUFA6P56556 154 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST1H2BDP58876 126 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST1H2BCP62807 126 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 RPL31P62899 125 aaKnown RBP2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 HLA-DRB3P79483 266 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 UNC119Q13432 240 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 FAM53BQ14153 422 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 EIF2B1Q14232 305 aaKnown RBP2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 GNMTQ14749 295 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR8B8Q15620 311 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 TAF9Q16594 264 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST2H2BEQ16778 126 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 IQCJQ1A5X6 159 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 TMEM241Q24JQ0 296 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 TBC1D28Q2M2D7 210 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 IAH1Q2TAA2 248 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 C15orf32Q32M92 178 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 ACOT6Q3I5F7 207 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 TIGITQ495A1 244 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 DEFB134Q4QY38 66 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 DCAF12Q5T6F0 453 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 AADACL3Q5VUY0 350 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 C1orf140Q5VVS0 124 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 FBXW12Q6X9E4 464 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 HMGN2P46Q86SG4 172 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 H1FOOQ8IZA3 346 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 CA13Q8N1Q1 262 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 CHST4Q8NCG5 386 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 APCDD1LQ8NCL9 501 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 PLPP5Q8NEB5 264 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR10D4PQ8NGN7 298 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR10AC1Q8NH08 325 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 MFSD8Q8NHS3 518 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 FLVCR1-AS1Q8TAF5 88 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 SSC4DQ8WTU2 575 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 PP6455Q8WZ26 134 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST1H2BHQ93079 126 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 IL22RA2Q969J5 263 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 MRPL24Q96A35 216 aaKnown RBP2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 DDIT4LQ96D03 193 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST1H2BNQ99877 126 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST1H2BMQ99879 126 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 AGMATQ9BSE5 352 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 TMEM59Q9BXS4 323 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR8D2Q9GZM6 311 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZBP1Q9H171 429 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms