RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 TNCP24821 2201 aa12.87□□□□□ -0.35
LINC00398-201ENST00000414407 LYRM1O43325 122 aa12.87□□□□□ -0.35
LINC00398-201ENST00000414407 SOX15O60248 233 aa12.87□□□□□ -0.35
LINC00398-201ENST00000414407 SNAPC5O75971 98 aa12.87□□□□□ -0.35
LINC00398-201ENST00000414407 OR5AC1P0C628 307 aa12.87□□□□□ -0.35
LINC00398-201ENST00000414407 CDX1P47902 265 aaPredicted RBP12.87□□□□□ -0.35
LINC00398-201ENST00000414407 TRIM16LQ309B1 348 aa12.87□□□□□ -0.35
LINC00398-201ENST00000414407 TMEM128Q5BJH2 165 aa12.87□□□□□ -0.35
LINC00398-201ENST00000414407 ASPHD1Q5U4P2 390 aa12.87□□□□□ -0.35
LINC00398-201ENST00000414407 THOC7Q6I9Y2 204 aaKnown RBP12.87□□□□□ -0.35
LINC00398-201ENST00000414407 H2BFWTQ7Z2G1 175 aa12.87□□□□□ -0.35
LINC00398-201ENST00000414407 ADAD2Q8NCV1 583 aaKnown RBP12.87□□□□□ -0.35
LINC00398-201ENST00000414407 SRSF8Q9BRL6 282 aaKnown RBP12.87□□□□□ -0.35
LINC00398-201ENST00000414407 COMMD5Q9GZQ3 224 aa12.87□□□□□ -0.35
LINC00398-201ENST00000414407 SLA2Q9H6Q3 261 aa12.87□□□□□ -0.35
LINC00398-201ENST00000414407 FKBP11Q9NYL4 201 aa12.87□□□□□ -0.35
LINC00398-201ENST00000414407 PRNDQ9UKY0 176 aa12.87□□□□□ -0.35
LINC00398-201ENST00000414407 TRAV3A0A0B4J244 114 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 PIGBOS1A0A0B4J2F0 54 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 LINC00854A0A1B0GVQ3 168 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 TEX22C9J3V5 150 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 RPLP1P05386 114 aaKnown RBP12.86□□□□□ -0.35
LINC00398-201ENST00000414407 PF4V1P10720 104 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 ANXA3P12429 323 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 AKR1C4P17516 323 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 BTCP35070 178 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 RAB9AP51151 201 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 CCR6P51684 374 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 OR2B8PP59922 312 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 UBE2MP61081 183 aaKnown RBP12.86□□□□□ -0.35
LINC00398-201ENST00000414407 NSUN5P1Q3KNT7 163 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 KHDC1LQ5JSQ8 128 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 C10orf55Q5SWW7 151 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 SLC25A42Q86VD7 318 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 TTC9CQ8N5M4 171 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 OR4F17Q8NGA8 305 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 FAM110DQ8TAY7 271 aaPredicted RBP12.86□□□□□ -0.35
LINC00398-201ENST00000414407 IL22RA2Q969J5 263 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 TMEM56Q96MV1 263 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 OR4F4Q96R69 305 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 TMEM56-RWDD3S4R434 201 aa12.86□□□□□ -0.35
LINC00398-201ENST00000414407 IGKV1-5P01602 117 aa12.85□□□□□ -0.35
LINC00398-201ENST00000414407 OR9G9P0C7N8 305 aa12.85□□□□□ -0.35
LINC00398-201ENST00000414407 P0C879 139 aa12.85□□□□□ -0.35
LINC00398-201ENST00000414407 SUPT4H1P63272 117 aaKnown RBP12.85□□□□□ -0.35
LINC00398-201ENST00000414407 SRPXP78539 464 aa12.85□□□□□ -0.35
LINC00398-201ENST00000414407 KIAA0141Q14154 515 aaPredicted RBP12.85□□□□□ -0.35
LINC00398-201ENST00000414407 TMEM187Q14656 261 aa12.85□□□□□ -0.35
LINC00398-201ENST00000414407 HIST2H2BDQ6DRA6 164 aa12.85□□□□□ -0.35
LINC00398-201ENST00000414407 TMED4Q7Z7H5 227 aa12.85□□□□□ -0.35
LINC00398-201ENST00000414407 FAM219AQ8IW50 185 aa12.85□□□□□ -0.35
LINC00398-201ENST00000414407 CENPSQ8N2Z9 138 aa12.85□□□□□ -0.35
LINC00398-201ENST00000414407 OR5B3Q8NH48 314 aa12.85□□□□□ -0.35
LINC00398-201ENST00000414407 RBPMSQ93062 196 aaKnown RBP12.85□□□□□ -0.35
LINC00398-201ENST00000414407 UBE2E2Q96LR5 201 aa12.85□□□□□ -0.35
LINC00398-201ENST00000414407 KLK15Q9H2R5 256 aa12.85□□□□□ -0.35
LINC00398-201ENST00000414407 TMEM14BQ9NUH8 114 aa12.85□□□□□ -0.35
LINC00398-201ENST00000414407 A0A1W2PRX2 142 aa12.84□□□□□ -0.35
LINC00398-201ENST00000414407 C15orf61A6NNL5 157 aa12.84□□□□□ -0.35
LINC00398-201ENST00000414407 E7EUB6 86 aa12.84□□□□□ -0.35
LINC00398-201ENST00000414407 UPK1BO75841 260 aa12.84□□□□□ -0.35
LINC00398-201ENST00000414407 AKR1C2P52895 323 aa12.84□□□□□ -0.35
LINC00398-201ENST00000414407 HSD17B13Q7Z5P4 300 aaPredicted RBP12.84□□□□□ -0.35
LINC00398-201ENST00000414407 ZNF695Q8IW36 515 aa12.84□□□□□ -0.35
LINC00398-201ENST00000414407 SELENOHQ8IZQ5 122 aaKnown RBP12.84□□□□□ -0.35
LINC00398-201ENST00000414407 ZNF491Q8N8L2 437 aa12.84□□□□□ -0.35
LINC00398-201ENST00000414407 OR5T1Q8NG75 326 aa12.84□□□□□ -0.35
LINC00398-201ENST00000414407 OR1L8Q8NGR8 309 aa12.84□□□□□ -0.35
LINC00398-201ENST00000414407 OR4A16Q8NH70 328 aa12.84□□□□□ -0.35
LINC00398-201ENST00000414407 RRNAD1Q96FB5 475 aaKnown RBP12.84□□□□□ -0.35
LINC00398-201ENST00000414407 FYTTD1Q96QD9 318 aaKnown RBP12.84□□□□□ -0.35
LINC00398-201ENST00000414407 QTRT1Q9BXR0 403 aaKnown RBP12.84□□□□□ -0.35
LINC00398-201ENST00000414407 ZNF257Q9Y2Q1 563 aa12.84□□□□□ -0.35
LINC00398-201ENST00000414407 OR51B2Q9Y5P1 312 aa12.84□□□□□ -0.35
LINC00398-201ENST00000414407 TEX50A0A1B0GTY4 177 aa12.83□□□□□ -0.36
LINC00398-201ENST00000414407 A0A1B0GW64 132 aa12.83□□□□□ -0.36
LINC00398-201ENST00000414407 CGB1A6NKQ9 187 aa12.83□□□□□ -0.36
LINC00398-201ENST00000414407 NPIPB5A8MRT5 1133 aa12.83□□□□□ -0.36
LINC00398-201ENST00000414407 CRYGCP07315 174 aa12.83□□□□□ -0.36
LINC00398-201ENST00000414407 TRAPPC2P0DI81 140 aa12.83□□□□□ -0.36
LINC00398-201ENST00000414407 TRAPPC2BP0DI82 140 aa12.83□□□□□ -0.36
LINC00398-201ENST00000414407 ASAH1Q13510 395 aa12.83□□□□□ -0.36
LINC00398-201ENST00000414407 LCNL1Q6ZST4 164 aa12.83□□□□□ -0.36
LINC00398-201ENST00000414407 ZNF429Q86V71 674 aa12.83□□□□□ -0.36
LINC00398-201ENST00000414407 LHFPL5Q8TAF8 219 aa12.83□□□□□ -0.36
LINC00398-201ENST00000414407 C4orf3Q8WVX3 66 aa12.83□□□□□ -0.36
LINC00398-201ENST00000414407 NDUFA4L2Q9NRX3 87 aa12.83□□□□□ -0.36
LINC00398-201ENST00000414407 NSG2Q9Y328 171 aa12.83□□□□□ -0.36
LINC00398-201ENST00000414407 HMX3A6NHT5 357 aa12.82□□□□□ -0.36
LINC00398-201ENST00000414407 TSPAN15O95858 294 aa12.82□□□□□ -0.36
LINC00398-201ENST00000414407 MYOD1P15172 320 aa12.82□□□□□ -0.36
LINC00398-201ENST00000414407 RUNX1Q01196 453 aa12.82□□□□□ -0.36
LINC00398-201ENST00000414407 KLK9Q2XQG4 91 aa12.82□□□□□ -0.36
LINC00398-201ENST00000414407 TMEM268Q5VZI3 342 aa12.82□□□□□ -0.36
LINC00398-201ENST00000414407 MZT2BQ6NZ67 158 aa12.82□□□□□ -0.36
LINC00398-201ENST00000414407 LGI3Q8N145 548 aa12.82□□□□□ -0.36
LINC00398-201ENST00000414407 KLHL30-AS1Q8NEE0 82 aa12.82□□□□□ -0.36
LINC00398-201ENST00000414407 LSM10Q969L4 123 aaKnown RBP12.82□□□□□ -0.36
LINC00398-201ENST00000414407 ZNF355PQ9NSJ1 428 aa12.82□□□□□ -0.36
LINC00398-201ENST00000414407 COA4Q9NYJ1 87 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms