RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 P2RY6Q15077 328 aa11.16□□□□□ -0.62
COL6A2-204ENST00000409416 WDR82Q6UXN9 313 aa11.16□□□□□ -0.62
COL6A2-204ENST00000409416 Q6ZT83 130 aa11.16□□□□□ -0.62
COL6A2-204ENST00000409416 C22orf34Q6ZV56 151 aa11.16□□□□□ -0.62
COL6A2-204ENST00000409416 IGHV2OR16-5A0A0B4J2B6 119 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 B4DEV8 164 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 CD81P60033 236 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 OR4X1Q8NH49 305 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 ABHD17AQ96GS6 310 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 ACTR3CQ9C0K3 210 aaPredicted RBP11.15□□□□□ -0.62
COL6A2-204ENST00000409416 CXXC4Q9H2H0 198 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 PRDM13Q9H4Q3 707 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 MARCH11A6NNE9 402 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 OR7C2O60412 319 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 MGST1P10620 155 aaKnown RBP11.15□□□□□ -0.62
COL6A2-204ENST00000409416 COX5AP20674 150 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 PRR27Q6MZM9 219 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 NEU1Q99519 415 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 TUBG2Q9NRH3 451 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 MRPS18CQ9Y3D5 142 aaKnown RBP11.15□□□□□ -0.62
COL6A2-204ENST00000409416 HCFC1P51610 2035 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 C2CD3Q4AC94 2353 aa11.15□□□□□ -0.62
COL6A2-204ENST00000409416 IGHV1-18A0A0C4DH31 117 aa11.15□□□□□ -0.63
COL6A2-204ENST00000409416 ZNF705FA8MVS1 300 aaPredicted RBP11.15□□□□□ -0.63
COL6A2-204ENST00000409416 ZNF705DP0CH99 300 aaPredicted RBP11.15□□□□□ -0.63
COL6A2-204ENST00000409416 ZNF705BP0CI00 300 aaPredicted RBP11.15□□□□□ -0.63
COL6A2-204ENST00000409416 PLGLAQ15195 96 aa11.15□□□□□ -0.63
COL6A2-204ENST00000409416 MRPL41Q8IXM3 137 aaKnown RBP11.15□□□□□ -0.63
COL6A2-204ENST00000409416 TMEM147Q9BVK8 224 aa11.15□□□□□ -0.63
COL6A2-204ENST00000409416 PIGBOS1A0A0B4J2F0 54 aa11.14□□□□□ -0.63
COL6A2-204ENST00000409416 C11orf94C9JXX5 98 aa11.14□□□□□ -0.63
COL6A2-204ENST00000409416 SCGB1D1O95968 90 aa11.14□□□□□ -0.63
COL6A2-204ENST00000409416 FAM78BQ5VT40 261 aa11.14□□□□□ -0.63
COL6A2-204ENST00000409416 CD177Q8N6Q3 437 aa11.14□□□□□ -0.63
COL6A2-204ENST00000409416 COQ2Q96H96 371 aa11.14□□□□□ -0.63
COL6A2-204ENST00000409416 LRRC30A6NM36 301 aa11.14□□□□□ -0.63
COL6A2-204ENST00000409416 RPL23P62829 140 aaKnown RBP11.14□□□□□ -0.63
COL6A2-204ENST00000409416 SRSF7Q16629 238 aaKnown RBP eCLIP11.14□□□□□ -0.63
COL6A2-204ENST00000409416 Q8IYB0 196 aa11.14□□□□□ -0.63
COL6A2-204ENST00000409416 ZNF645Q8N7E2 425 aa11.14□□□□□ -0.63
COL6A2-204ENST00000409416 PSMG3Q9BT73 122 aaPredicted RBP11.14□□□□□ -0.63
COL6A2-204ENST00000409416 PLEKHA3Q9HB20 300 aa11.14□□□□□ -0.63
COL6A2-204ENST00000409416 PRRG2O14669 202 aa11.13□□□□□ -0.63
COL6A2-204ENST00000409416 RAB4AP20338 218 aa11.13□□□□□ -0.63
COL6A2-204ENST00000409416 STUMQ69YW2 141 aa11.13□□□□□ -0.63
COL6A2-204ENST00000409416 LINC01560Q8TB33 94 aa11.13□□□□□ -0.63
COL6A2-204ENST00000409416 CDC34P49427 236 aaPredicted RBP11.13□□□□□ -0.63
COL6A2-204ENST00000409416 PMS2P11Q13670 270 aa11.13□□□□□ -0.63
COL6A2-204ENST00000409416 MSMPQ1L6U9 139 aa11.13□□□□□ -0.63
COL6A2-204ENST00000409416 ACP7Q6ZNF0 438 aa11.13□□□□□ -0.63
COL6A2-204ENST00000409416 MBD3L1Q8WWY6 194 aa11.13□□□□□ -0.63
COL6A2-204ENST00000409416 HIST1H2BLQ99880 126 aa11.13□□□□□ -0.63
COL6A2-204ENST00000409416 CTXND1A0A1B0GTU2 59 aa11.13□□□□□ -0.63
COL6A2-204ENST00000409416 TRAV1-1A0A0B4J248 108 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 ZNF320A2RRD8 509 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 KBTBD11O94819 623 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 OR5I1Q13606 314 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 PRSS8Q16651 343 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 C10orf55Q5SWW7 151 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 C19orf35Q6ZS72 473 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 PPP1R35Q8TAP8 253 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 HSD17B10Q99714 261 aaKnown RBP11.12□□□□□ -0.63
COL6A2-204ENST00000409416 DERL1Q9BUN8 251 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 NPCDR1Q9BY65 106 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 HIPK2Q9H2X6 1198 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 ELOA3CA0A087WX78 387 aaPredicted RBP11.12□□□□□ -0.63
COL6A2-204ENST00000409416 IFNL4K9M1U5 179 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 NDUFB4O95168 129 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 OR9G9P0C7N8 305 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 ATP5G3P48201 142 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 MRPS11P82912 194 aaKnown RBP11.12□□□□□ -0.63
COL6A2-204ENST00000409416 HCP5Q6MZN7 132 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 INO80CQ6PI98 192 aaPredicted RBP11.12□□□□□ -0.63
COL6A2-204ENST00000409416 OR10X1Q8NGY0 326 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 C2orf88Q9BSF0 95 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 LPAR2Q9HBW0 351 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 IGHV3OR16-8A0A075B7F1 116 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 IGHV3-35A0A0C4DH35 117 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 OOEPA6NGQ2 149 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 M0R143 59 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 OR5G3P0C626 314 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 GZMHP20718 246 aa11.12□□□□□ -0.63
COL6A2-204ENST00000409416 NEIL1Q96FI4 390 aaPredicted RBP11.12□□□□□ -0.63
COL6A2-204ENST00000409416 PRR33A8MZF0 331 aa11.11□□□□□ -0.63
COL6A2-204ENST00000409416 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.11□□□□□ -0.63
COL6A2-204ENST00000409416 PEAR1Q5VY43 1037 aaPredicted RBP11.11□□□□□ -0.63
COL6A2-204ENST00000409416 STARD4Q96DR4 205 aa11.11□□□□□ -0.63
COL6A2-204ENST00000409416 C5orf30Q96GV9 206 aa11.11□□□□□ -0.63
COL6A2-204ENST00000409416 PITPNC1Q9UKF7 332 aa11.11□□□□□ -0.63
COL6A2-204ENST00000409416 TRBV6-6A0A0A6YYG2 114 aa11.11□□□□□ -0.63
COL6A2-204ENST00000409416 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
COL6A2-204ENST00000409416 MKRN2OSH3BPM6 223 aa11.11□□□□□ -0.63
COL6A2-204ENST00000409416 RRHO14718 337 aa11.11□□□□□ -0.63
COL6A2-204ENST00000409416 MMP23AO75900 390 aa11.11□□□□□ -0.63
COL6A2-204ENST00000409416 CD33P20138 364 aa11.11□□□□□ -0.63
COL6A2-204ENST00000409416 ZNF474Q6S9Z5 364 aaPredicted RBP11.11□□□□□ -0.63
COL6A2-204ENST00000409416 OR2T10Q8NGZ9 312 aa11.11□□□□□ -0.63
COL6A2-204ENST00000409416 P2RX4Q99571 388 aa11.11□□□□□ -0.63
COL6A2-204ENST00000409416 VPS25Q9BRG1 176 aa11.11□□□□□ -0.63
COL6A2-204ENST00000409416 PCSK5Q92824 1860 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms