RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 HEBP2Q9Y5Z4 205 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 C3orf85A0A1B0GTC6 90 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 LOC102725191A0A1B0GVB3 256 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 A0A1W2PNV4 684 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 ZNF850A8MQ14 1090 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 FOXI3A8MTJ6 420 aaPredicted RBP4.54□□□□□ -1.68
CLK1-202ENST00000409403 C4orf51C9J302 202 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 H7C1C5 153 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 J3QR89 54 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 SMPD2O60906 423 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 NDUFB4O95168 129 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 HLA-DRB1P01911 266 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 KITLGP21583 273 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 CCNOP22674 350 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 GNLYP22749 145 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 OMGP23515 440 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 MC5RP33032 325 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 P2RY2P41231 377 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 AMTP48728 403 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 DAP3P51398 398 aaKnown RBP4.54□□□□□ -1.68
CLK1-202ENST00000409403 CLDN15P56746 228 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 RUNX1Q01196 453 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 HLA-DRB5Q30154 266 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 TDRG1Q3Y452 100 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 FFAR4Q5NUL3 377 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 FAM58AQ8N1B3 248 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 C17orf78Q8N4C9 275 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 METTL27Q8N6F8 245 aaPredicted RBP4.54□□□□□ -1.68
CLK1-202ENST00000409403 ZIC4Q8N9L1 334 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 SCCPDHQ8NBX0 429 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 RNF133Q8WVZ7 376 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 TMEM186Q96B77 213 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 AP1S3Q96PC3 154 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 ATP6V0BQ99437 205 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 FAM110AQ9BQ89 295 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 PMCHL2Q9BQD1 86 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 RSG1Q9BU20 258 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 GNB1LQ9BYB4 327 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 PBOV1Q9GZY1 135 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 TMEM222Q9H0R3 208 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 TXNIPQ9H3M7 391 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 C6orf106Q9H6K1 298 aaPredicted RBP4.54□□□□□ -1.68
CLK1-202ENST00000409403 NRN1Q9NPD7 142 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 MRPL22Q9NWU5 206 aaKnown RBP4.54□□□□□ -1.68
CLK1-202ENST00000409403 FAM206AQ9NX38 181 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 ZNF581Q9P0T4 197 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 NOTCH1P46531 2555 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 ESPL1Q14674 2120 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 IGKV1-8A0A0C4DH67 115 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 LRP5LA4QPB2 252 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 NKX2-6A6NCS4 301 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 TAX1BP3O14907 124 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 ZNF324O75467 553 aaPredicted RBP4.54□□□□□ -1.68
CLK1-202ENST00000409403 CST7O76096 145 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 TTRP02766 147 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 SLC35E2P0CK97 266 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 VDAC1P21796 283 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 CCR2P41597 374 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 RPS27P42677 84 aaKnown RBP4.54□□□□□ -1.68
CLK1-202ENST00000409403 SEC11AP67812 179 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 ARG2P78540 354 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 ZNF90Q03938 601 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 EXOSC7Q15024 291 aaKnown RBP4.54□□□□□ -1.68
CLK1-202ENST00000409403 ADIPOQQ15848 244 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 LRRC75BQ2VPJ9 315 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 TMEM249Q2WGJ8 235 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 HAPLN4Q86UW8 402 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 CALHM1Q8IU99 346 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 FER1L6-AS1Q8NA97 138 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 OR10W1Q8NGF6 305 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 OR5A1Q8NGJ0 315 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 OR2Y1Q8NGV0 311 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 OR11L1Q8NGX0 322 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 OR4F5Q8NH21 305 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 SGMS2Q8NHU3 365 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 WBP2Q969T9 261 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 ADAT3Q96EY9 351 aaPredicted RBP4.54□□□□□ -1.68
CLK1-202ENST00000409403 SFRP2Q96HF1 295 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 C1orf147Q96MC9 270 aaPredicted RBP4.54□□□□□ -1.68
CLK1-202ENST00000409403 OR4F4Q96R69 305 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 KCNIP2Q9NS61 270 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 PLEKHJ1Q9NW61 149 aa4.54□□□□□ -1.68
CLK1-202ENST00000409403 SCN3AQ9NY46 2000 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 TRAV34A0A0B4J273 112 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 IGLV5-39A0A0G2JS06 123 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 SERTM2A0A1B0GWG4 89 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 SLC33A1O00400 549 aaPredicted RBP4.53□□□□□ -1.68
CLK1-202ENST00000409403 NUPR1O60356 82 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 LINC00869P0C866 280 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 IGLC1P0CG04 106 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 CCL1P22362 96 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 HNRNPA2B1P22626 353 aaKnown RBP4.53□□□□□ -1.68
CLK1-202ENST00000409403 OR3A4PP47883 348 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 REG1BP48304 166 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 ADORA2A-AS1P86434 159 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 TMEM267Q0VDI3 215 aaPredicted RBP4.53□□□□□ -1.68
CLK1-202ENST00000409403 ACKR1Q16570 336 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 SP6Q3SY56 376 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 PHLDA2Q53GA4 152 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 TCTEX1D4Q5JR98 221 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms