RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 GOLT1AQ6ZVE7 132 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 MRPL52Q86TS9 123 aaKnown RBP10.43□□□□□ -0.74
SHANK2-203ENST00000409161 SDF2L1Q9HCN8 221 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 LOC390937A0A1W2PQ73 354 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 ZNF815PA8K554 130 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 UCP2P55851 309 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 H2BFSP57053 126 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 TMEM95Q3KNT9 176 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.43□□□□□ -0.74
SHANK2-203ENST00000409161 SPANXDQ9BXN6 97 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 A8MXK9 166 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 NXPH1P58417 271 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 CYP2G1PQ6ZSU1 146 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 PLXNA2O75051 1894 aa10.43□□□□□ -0.74
SHANK2-203ENST00000409161 RND2P52198 227 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 S100A7L2Q5SY68 101 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 ZNF324BQ6AW86 544 aaPredicted RBP10.42□□□□□ -0.74
SHANK2-203ENST00000409161 NDUFAF3Q9BU61 184 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 NPCDR1Q9BY65 106 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 YBX2Q9Y2T7 364 aaKnown RBP10.42□□□□□ -0.74
SHANK2-203ENST00000409161 FAM74A4Q5TZK3 123 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 RPP21Q9H633 154 aaKnown RBP10.42□□□□□ -0.74
SHANK2-203ENST00000409161 A0A1W2PP11 408 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 C9orf172C9J069 976 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 CISD3P0C7P0 127 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 GPR183P32249 361 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 PCSK4Q6UW60 755 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 POC1AQ8NBT0 407 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 IDI2-AS1Q9NZ38 188 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 HCFC1P51610 2035 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 IGHMP01871 453 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 RNFT1Q5M7Z0 435 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 MEX3AA1L020 520 aaKnown RBP10.42□□□□□ -0.74
SHANK2-203ENST00000409161 IZUMO1RA6ND01 250 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 PEX7O00628 323 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 PPBPP02775 128 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 REG1BP48304 166 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 TRIP6Q15654 476 aaKnown RBP10.42□□□□□ -0.74
SHANK2-203ENST00000409161 LINC00305Q7Z4B0 112 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 ST20Q9HBF5 79 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 NBASA2RRP1 2371 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 MDKP21741 143 aaPredicted RBP10.42□□□□□ -0.74
SHANK2-203ENST00000409161 TRAV8-4A0A0B4J246 113 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 GPR6P46095 362 aaPredicted RBP10.42□□□□□ -0.74
SHANK2-203ENST00000409161 Q96M66 194 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 RTN4RQ9BZR6 473 aa10.42□□□□□ -0.74
SHANK2-203ENST00000409161 TRBV5-7A0A0A0MS05 114 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 KBTBD11-OT1A0A1B0GTJ5 212 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 SCTP09683 121 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 NABP2Q9BQ15 211 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 CALYQ9NYX4 217 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 LAMTOR2Q9Y2Q5 125 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 CCL27Q9Y4X3 112 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 PLXNB3Q9ULL4 1909 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 UCNP55089 124 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 ZSWIM8A7E2V4 1837 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 CKS1BP61024 79 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 MED12LQ86YW9 2145 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 NPIPB11E5RHQ5 1161 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 COX5BP10606 129 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 SRSF6Q13247 344 aaKnown RBP10.41□□□□□ -0.74
SHANK2-203ENST00000409161 UNC119Q13432 240 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 SLC25A53Q5H9E4 307 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 CACNG8Q8WXS5 425 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 RCC1LQ96I51 464 aaKnown RBP10.41□□□□□ -0.74
SHANK2-203ENST00000409161 USF3Q68DE3 2245 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 TM4SF5O14894 197 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 APOHP02749 345 aaPredicted RBP10.41□□□□□ -0.74
SHANK2-203ENST00000409161 CXorf66Q5JRM2 361 aaPredicted RBP10.41□□□□□ -0.74
SHANK2-203ENST00000409161 OR10J3Q5JRS4 329 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 CHCHD1Q96BP2 118 aaKnown RBP10.41□□□□□ -0.74
SHANK2-203ENST00000409161 C14orf144Q96I85 54 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 PIMREGQ9BSJ6 248 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 NXT2Q9NPJ8 142 aaKnown RBP10.41□□□□□ -0.74
SHANK2-203ENST00000409161 CYSLTR1Q9Y271 337 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 AHRRA9YTQ3 701 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 C9orf40Q8IXQ3 194 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 CLEC7AQ9BXN2 247 aa10.41□□□□□ -0.74
SHANK2-203ENST00000409161 PAX2Q02962 417 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 HCP5Q6MZN7 132 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 LIMS2Q7Z4I7 341 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 PLCE1Q9P212 2302 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 IGHV3-21A0A0B4J1V1 117 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 PLAURQ03405 335 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 ZNF721Q8TF20 911 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 WNT10AQ9GZT5 417 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 PRR33A8MZF0 331 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 STARD6P59095 220 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 OR5AN1Q8NGI8 311 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 RNASEH2CQ8TDP1 164 aaKnown RBP10.4□□□□□ -0.74
SHANK2-203ENST00000409161 TCF19Q9Y242 345 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 PF4V1P10720 104 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 TMEM187Q14656 261 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 FBLN7Q53RD9 439 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 GGTLC3B5MD39 225 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 UNQ5815/PRO19632Q6UWF5 114 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 DUX5Q96PT3 197 aa10.4□□□□□ -0.74
SHANK2-203ENST00000409161 TNCP24821 2201 aa10.4□□□□□ -0.75
SHANK2-203ENST00000409161 C1orf210Q8IVY1 113 aa10.4□□□□□ -0.75
SHANK2-203ENST00000409161 OR9G1Q8NH87 305 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms