RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 NPPCP23582 126 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 TIMP3P35625 211 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 ETFRF1Q6IPR1 90 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 RPRMLQ8N4K4 120 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 OR10W1Q8NGF6 305 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 CHRNA10Q9GZZ6 450 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 MPC1Q9Y5U8 109 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 SMPD2O60906 423 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 LMO1P25800 156 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 HOXA6P31267 233 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 SPCS3P61009 180 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 RANP62826 216 aaKnown RBP6.95□□□□□ -1.3
SNX13-201ENST00000409076 PNRC1Q12796 327 aaPredicted RBP6.95□□□□□ -1.3
SNX13-201ENST00000409076 TMSB15BA0A087X1C1 80 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 IGHV3-35A0A0C4DH35 117 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 GFRA1P56159 465 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 KRTCAP3Q53RY4 240 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 C1orf210Q8IVY1 113 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 FAM216BQ8N7L0 139 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 LYPD6BQ8NI32 183 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 ITLN1Q8WWA0 313 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 CCL17Q92583 94 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 OR2V2Q96R30 315 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 TMEM140Q9NV12 185 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 ARL2-SNX15V9GYD0 113 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 OTOGLQ3ZCN5 2332 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 MUC6Q6W4X9 2439 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 A8MXE2 369 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 OR10J1P30954 320 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 PRDX2P32119 198 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 MAJINQ3KP22 176 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 STUMQ69YW2 141 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 CYP2G1PQ6ZSU1 146 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 DEFB124Q8NES8 71 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 OR2D3Q8NGH3 330 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 C5orf30Q96GV9 206 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 SPTBN4Q9H254 2564 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 MLNRO43193 412 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 CA11O75493 328 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 MOSP00540 346 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 SRIP30626 198 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 CHRNB4P30926 498 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 GNG4P50150 75 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 GNG5P63218 68 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 CARFQ8N187 725 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 ZNF645Q8N7E2 425 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 COQ2Q96H96 371 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 TMEM68Q96MH6 324 aa6.94□□□□□ -1.3
SNX13-201ENST00000409076 GSX1Q9H4S2 264 aaPredicted RBP6.94□□□□□ -1.3
SNX13-201ENST00000409076 SVEP1Q4LDE5 3571 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 LOC102723996A0A087X1L8 192 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 DKK1O94907 266 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 PYYP10082 97 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 ZFP36L1Q07352 338 aaKnown RBP6.93□□□□□ -1.3
SNX13-201ENST00000409076 RIPPLY2Q5TAB7 128 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 Q6P435 159 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 Q6ZN92 141 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 SFRP2Q96HF1 295 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 SNHG12Q9BXW3 62 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 SEMA5BQ9P283 1151 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 SPENQ96T58 3664 aaKnown RBP6.93□□□□□ -1.3
SNX13-201ENST00000409076 LRBAP50851 2863 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 A0A1W2PN81 502 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 SH2D7A6NKC9 451 aaPredicted RBP6.93□□□□□ -1.3
SNX13-201ENST00000409076 M0R143 59 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 CA2P00918 260 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 CECR9P0C854 216 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 SERF2P84101 59 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 SMIM21Q3B7S5 101 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 ZNF718Q3SXZ3 478 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 MUC15Q8N387 334 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 STPG3Q8N7X2 389 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 FLYWCH2Q96CP2 140 aaKnown RBP6.93□□□□□ -1.3
SNX13-201ENST00000409076 OR6C3Q9NZP0 311 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 ZNF835Q9Y2P0 537 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 YTHDF2Q9Y5A9 579 aaKnown RBP6.93□□□□□ -1.3
SNX13-201ENST00000409076 KMT2EQ8IZD2 1858 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 PTPN13Q12923 2485 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 CSPG4Q6UVK1 2322 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 OPRK1P41145 380 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 TNFSF10P50591 281 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 PLGLAQ15195 96 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 RBMXL3Q8N7X1 1067 aaKnown RBP6.93□□□□□ -1.3
SNX13-201ENST00000409076 FDCSPQ8NFU4 85 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 OR9G1Q8NH87 305 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 OR2T6Q8NHC8 308 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 ZC2HC1AQ96GY0 325 aa6.93□□□□□ -1.3
SNX13-201ENST00000409076 ASH1LQ9NR48 2969 aaKnown RBP6.92□□□□□ -1.3
SNX13-201ENST00000409076 OOEPA6NGQ2 149 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 HPRT1P00492 218 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 NPY1RP25929 384 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 FXYD7P58549 80 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 RAB31Q13636 194 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 MMDQ15546 238 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 TIGITQ495A1 244 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 CENPWQ5EE01 88 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 ZNF497Q6ZNH5 498 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 ZNF71Q9NQZ8 489 aaPredicted RBP6.92□□□□□ -1.3
SNX13-201ENST00000409076 PLSCR2Q9NRY7 297 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 ZNF355PQ9NSJ1 428 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms