RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 GCSAMLQ5JQS6 135 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 DTX1Q86Y01 620 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 WIPI2Q9Y4P8 454 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 ARL2-SNX15V9GYD0 113 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 MUC22E2RYF6 1773 aaPredicted RBP13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 IGHV3-72A0A0B4J1Y9 119 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 NDUFB3O43676 98 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 PSG5Q15238 335 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 GABRA6Q16445 453 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 HIST3H3Q16695 136 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 RPEL1Q2QD12 228 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 ASCL5Q7RTU5 278 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 TMEM170AQ8WVE7 144 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 LSM10Q969L4 123 aaKnown RBP13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 MRPL18Q9H0U6 180 aaKnown RBP13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 ODAMA1E959 279 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 CNIH1O95406 144 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 STUMQ69YW2 141 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 ETFRF1Q6IPR1 90 aa13.19□□□□□ -0.3
CCDC85A-201ENST00000407595 CBY3A6NI87 242 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 OTX1P32242 354 aaPredicted RBP13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 VKORC1L1Q8N0U8 176 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 ZNF355PQ9NSJ1 428 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 IL36GQ9NZH8 169 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 A8MWP6 167 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 CD3EP07766 207 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 ARL14EPLP0DKL9 152 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 TFPI2P48307 235 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 OR5B3Q8NH48 314 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 MBD3L1Q8WWY6 194 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 RNF7Q9UBF6 113 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 SELLP14151 372 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 KIR2DL2P43627 348 aaPredicted RBP13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 FXYD3Q14802 87 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 MOB3BQ86TA1 216 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 VPS25Q9BRG1 176 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 CRIM1Q9NZV1 1036 aa13.18□□□□□ -0.3
CCDC85A-201ENST00000407595 APOA2P02652 100 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 LGALS4P56470 323 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 NUTF2P61970 127 aaKnown RBP13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 RHOBP62745 196 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 RNASEKQ6P5S7 137 aaKnown RBP13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 TGIF2LYQ8IUE0 185 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 KLHDC1Q8N7A1 406 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 TMEM242Q9NWH2 141 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 PXMP4Q9Y6I8 212 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 REV3LO60673 3130 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 SFRP2Q96HF1 295 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 NPCDR1Q9BY65 106 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 COMMD5Q9GZQ3 224 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 RAMP3O60896 148 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 OR5G3P0C626 314 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 PAX9P55771 341 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 C20orf204Q6ZNR8 217 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 SPACA3Q8IXA5 215 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 ABHD12Q8N2K0 398 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 DAZAP1Q96EP5 407 aaKnown RBP13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 ONECUT1Q9UBC0 465 aa13.17□□□□□ -0.3
CCDC85A-201ENST00000407595 GNB2P62879 340 aa13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 MRPS11P82912 194 aaKnown RBP13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 PEAR1Q5VY43 1037 aaPredicted RBP13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 TMEM68Q96MH6 324 aa13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 DERL1Q9BUN8 251 aa13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 CEP192Q8TEP8 1941 aa13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 IGHV2OR16-5A0A0B4J2B6 119 aa13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 LY6DQ14210 128 aa13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 PRR30Q53SZ7 412 aaPredicted RBP13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 LRRC10Q5BKY1 277 aa13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 C2orf88Q9BSF0 95 aa13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 HELTA6NFD8 242 aa13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 C17orf98A8MV24 154 aa13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 HINT1P49773 126 aaPredicted RBP13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 COL5A1-AS1Q5SY13 56 aa13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 OR4C5Q8NGB2 326 aa13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 TPPP3Q9BW30 176 aa13.16□□□□□ -0.3
CCDC85A-201ENST00000407595 TRAV24A0A0B4J272 114 aa13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 IFNL4K9M1U5 179 aa13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 IGKV1-5P01602 117 aa13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 RPL31P62899 125 aaKnown RBP13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 MED12LQ86YW9 2145 aa13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 RBMXL3Q8N7X1 1067 aaKnown RBP13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 QTRT1Q9BXR0 403 aaKnown RBP13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 TRAV1-1A0A0B4J248 108 aa13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 IGKV1-6A0A0C4DH72 117 aa13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 OOEPA6NGQ2 149 aa13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 FOXI3A8MTJ6 420 aaPredicted RBP13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 K7EM74 188 aa13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 OR10J4P0C629 311 aa13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 PLPPR1Q8TBJ4 325 aa13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 MYO15AQ9UKN7 3530 aa13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 IGKV3D-15A0A087WSY6 115 aa13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 COX5BP10606 129 aa13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 RND2P52198 227 aa13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 MRPL37Q9BZE1 423 aaKnown RBP13.15□□□□□ -0.3
CCDC85A-201ENST00000407595 GZMHP20718 246 aa13.14□□□□□ -0.31
CCDC85A-201ENST00000407595 ZNF726P1Q15940 193 aa13.14□□□□□ -0.31
CCDC85A-201ENST00000407595 ZCCHC14Q8WYQ9 949 aaKnown RBP13.14□□□□□ -0.31
CCDC85A-201ENST00000407595 MRPS18CQ9Y3D5 142 aaKnown RBP13.14□□□□□ -0.31
CCDC85A-201ENST00000407595 LOC102724200A0A096LPH7 203 aaPredicted RBP13.14□□□□□ -0.31
CCDC85A-201ENST00000407595 SCO2A0A1W2PP80 73 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms